C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proline-rich coiled-coil 2C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028016 Prrc2c-006 ENSMUSG00000040225 10090 - 1:162673402-162740550 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028016
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028016 3.038±1.50 5.339±3.53 2.487±0.00 13.749±4.73 5.933±1.76 3.394±1.13 2.042±0.53 1.576±0.52 5.493±0.90 1.155±0.00 5.365±3.28 8.926±3.76 3.289±1.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007X5 CIL_0007X5_0002 VISTA 1:162530457-163133967
CIL_0005CU CIL_0005CU_0002 CGP 1:162670725-162813972

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000338920 PRRC2C-010 protein_coding Homo_sapiens 0 3518
ENST00000367742 PRRC2C-001 protein_coding Homo_sapiens 0 3518
ENST00000392078 PRRC2C-201 protein_coding Homo_sapiens 0 1875
ENST00000404428 PRRC2CP1-001 processed_pseudogene Homo_sapiens 4e-39 163
ENST00000426496 PRRC2C-202 protein_coding Homo_sapiens 0 3518
ENST00000463586 PRRC2C-004 retained_intron Homo_sapiens 0 424
ENST00000467601 PRRC2C-005 processed_transcript Homo_sapiens 0 843
ENST00000476522 PRRC2C-003 processed_transcript Homo_sapiens 0 1899
ENST00000480806 PRRC2C-006 processed_transcript Homo_sapiens 0 327
ENST00000495585 PRRC2C-002 protein_coding Homo_sapiens 0 1862
ENST00000498596 PRRC2C-008 processed_transcript Homo_sapiens 0 477

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