C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proline-rich coiled-coil 2C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182393 Prrc2c-003 ENSMUSG00000040225 10090 - 1:162671788-162705192 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000182393
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000182393 5.155±2.16 4.679±0.44 4.096±0.96 8.182±2.74 5.023±1.34 5.637±1.04 2.179±0.26 3.544±0.94 1.640±0.55 6.465±0.80 1.287±0.37 5.550±2.28 4.470±1.19 3.250±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007X5 CIL_0007X5_0002 VISTA 1:162530457-163133967
CIL_0005CU CIL_0005CU_0002 CGP 1:162670725-162813972

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002244 IGI hematopoietic progenitor cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000338920 PRRC2C-010 protein_coding Homo_sapiens 0 2922
ENST00000367742 PRRC2C-001 protein_coding Homo_sapiens 0 2922
ENST00000404428 PRRC2CP1-001 processed_pseudogene Homo_sapiens 4e-39 163
ENST00000426496 PRRC2C-202 protein_coding Homo_sapiens 0 2922
ENST00000492811 PRRC2C-009 processed_transcript Homo_sapiens 1e-18 97
ENST00000495585 PRRC2C-002 protein_coding Homo_sapiens 0 1792
ENST00000498596 PRRC2C-008 processed_transcript Homo_sapiens 0 477

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