C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proline-rich coiled-coil 2C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183223 Prrc2c-009 ENSMUSG00000040225 10090 - 1:162671785-162704766 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000183223
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000183223 6.223±2.02 14.472±4.74 4.050±0.19 7.302±2.39 10.253±4.08 8.171±2.75 3.576±0.94 5.067±0.57 3.168±1.19 10.267±1.91 1.638±0.29 11.999±4.81 8.519±3.56 4.394±0.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007X5 CIL_0007X5_0002 VISTA 1:162530457-163133967
CIL_0005CU CIL_0005CU_0002 CGP 1:162670725-162813972

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002244 IGI hematopoietic progenitor cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000338920 PRRC2C-010 protein_coding Homo_sapiens 0 2241
ENST00000367742 PRRC2C-001 protein_coding Homo_sapiens 0 2241
ENST00000404428 PRRC2CP1-001 processed_pseudogene Homo_sapiens 4e-39 163
ENST00000426496 PRRC2C-202 protein_coding Homo_sapiens 0 2241
ENST00000495585 PRRC2C-002 protein_coding Homo_sapiens 0 3066
ENST00000498596 PRRC2C-008 processed_transcript Homo_sapiens 0 475

Loading