C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005DC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000120738-ENSG00000120705 CGP 9606 5:138465490-138543300
GeneTranscriptPositionBiotype
ENSG00000120705 (ETF1)
eukaryotic translation termination factor 1 		ENST00000360541 (ETF1-001) 138506099-138543300 protein_coding
ENST00000499810 (ETF1-002) 138506095-138543229 protein_coding
ENST00000503014 (ETF1-003) 138507990-138541711 protein_coding
ENST00000503183 (ETF1-007) 138512699-138517641 retained_intron
ENST00000506345 (ETF1-004) 138511104-138517662 retained_intron
ENST00000507939 (ETF1-006) 138513651-138543209 protein_coding
ENST00000512198 (ETF1-008) 138511525-138543151 nonsense_mediated_decay
ENST00000514005 (ETF1-005) 138517561-138541686 processed_transcript
ENST00000572514 (ETF1-009) 138512772-138543216 protein_coding
ENSG00000120738 (EGR1)
early growth response 1 		ENST00000239938 (EGR1-001) 138465490-138469315 protein_coding
ENSG00000241458 (RPL7P19)
ribosomal protein L7 pseudogene 19 		ENST00000469948 (RPL7P19-001) 138473744-138474361 processed_pseudogene
CIL_0005DC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038418-ENSMUSG00000024360 CGP 10090 18:34859823-34932007
GeneTranscriptPositionBiotype
ENSMUSG00000024360 (Etf1)
eukaryotic translation termination factor 1 		ENSMUST00000025218 (Etf1-001) 34902785-34932007 protein_coding
ENSMUST00000180351 (Etf1-002) 34931834-34931941 protein_coding
ENSMUSG00000038418 (Egr1)
early growth response 1 		ENSMUST00000064795 (Egr1-001) 34859823-34864984 protein_coding
ENSMUST00000165033 (Egr1-201) 34861207-34864956 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005DC_0001ENSG00000120705ENST00000360541ENST00000499810ENST00000503014ENST00000503183ENST00000506345ENST00000507939ENST00000512198ENST00000514005ENST00000572514ENSG00000120738ENST00000239938ENSG00000241458ENST00000469948CIL_0005DC_0002ENSMUSG00000024360ENSMUST00000025218ENSMUST00000180351ENSMUSG00000038418ENSMUST00000064795ENSMUST00000165033
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005DC_0001ENSG00000120705ENST00000360541ENST00000499810ENST00000503014ENSG00000120738ENST00000239938ENSG00000241458ENST00000469948CIL_0005DC_0002ENSMUSG00000024360ENSMUST00000025218ENSMUSG00000038418ENSMUST00000064795ENSMUST00000165033
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000120705 ENST00000360541 31.003±0.00 22.060±0.00 1.412±0.00 11.467±6.19 20.942±13.61 15.019±10.15 12.283±8.33 26.376±0.00 10.701±1.93 19.556±11.09 12.785±11.76 14.724±7.92 20.967±0.97 18.425±6.01
ENST00000499810 N/A N/A 0.999±0.00 1.299±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503014 N/A N/A 1.772±0.00 N/A 1.631±0.00 N/A N/A N/A N/A N/A 15.531±0.00 5.673±3.54 16.077±0.00 18.446±9.25
ENST00000503183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514005 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572514 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000120738 ENST00000239938 298.150±0.00 104.972±0.00 5.117±0.00 9.378±6.55 156.874±149.04 29.049±26.56 3.312±2.44 16.576±16.05 26.947±22.21 36.046±33.19 9.666±2.46 124.827±118.46 44.308±1.19 17.622±10.39
ENSG00000241458 ENST00000469948 0.058±0.00 0.196±0.00 N/A 0.020±0.00 0.113±0.02 0.125±0.00 N/A 0.117±0.00 0.035±0.00 0.018±0.00 0.052±0.00 0.240±0.25 0.199±0.03 0.121±0.10
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024360 ENSMUST00000025218 18.522±2.37 15.379±2.35 24.490±2.87 18.928±2.49 14.202±2.18 13.111±1.43 13.251±0.55 14.783±1.46 19.255±7.96 15.554±0.96 24.003±0.84 20.275±8.84 58.988±31.50 23.809±4.93
ENSMUST00000180351 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000038418 ENSMUST00000064795 0.721±0.00 6.677±0.99 0.815±0.35 0.212±0.09 5.179±2.24 2.072±0.44 N/A 0.224±0.03 0.579±0.26 1.642±0.65 0.112±0.00 13.269±2.43 0.390±0.30 0.453±0.13
ENSMUST00000165033 7.333±0.94 5.372±0.86 6.667±2.29 6.173±7.15 17.245±7.91 6.925±2.39 5.407±0.53 1.896±0.24 2.396±1.23 7.883±3.02 1.021±0.17 23.761±15.33 0.925±0.44 1.954±1.26

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