C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005FW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000058063-ENSG00000043093 CGP 9606 3:182793500-182985953
GeneTranscriptPositionBiotype
ENSG00000043093 (DCUN1D1)
DCN1, defective in cullin neddylation 1, domain containing 1 		ENST00000292782 (DCUN1D1-001) 182938074-182980643 protein_coding
ENST00000460412 (DCUN1D1-004) 182963931-182985932 protein_coding
ENST00000466812 (DCUN1D1-006) 182964000-182985913 protein_coding
ENST00000469954 (DCUN1D1-002) 182945034-182985953 protein_coding
ENST00000487822 (DCUN1D1-005) 182963948-182985931 protein_coding
ENST00000492563 (DCUN1D1-008) 182945104-182980520 nonsense_mediated_decay
ENST00000497606 (DCUN1D1-007) 182961315-182980151 protein_coding
ENSG00000058063 (ATP11B)
ATPase, class VI, type 11B 		ENST00000323116 (ATP11B-001) 182793500-182921635 protein_coding
ENST00000466758 (ATP11B-006) 182873966-182919063 nonsense_mediated_decay
ENST00000475636 (ATP11B-008) 182898685-182913978 processed_transcript
ENST00000482070 (ATP11B-009) 182879539-182897325 protein_coding
ENST00000482794 (ATP11B-010) 182833673-182848557 processed_transcript
ENST00000484691 (ATP11B-011) 182898607-182914096 protein_coding
ENST00000490303 (ATP11B-005) 182865527-182914103 retained_intron
ENST00000491699 (ATP11B-007) 182897302-182915249 protein_coding
ENST00000493826 (ATP11B-002) 182793503-182836624 protein_coding
ENST00000498086 (ATP11B-004) 182837117-182918341 protein_coding
ENSG00000244346 (RP11-531F16.3)
 ENST00000460975 (RP11-531F16.3-001) 182950783-182956307 processed_pseudogene
ENSG00000270554 (RP11-225N10.3)
 ENST00000604149 (RP11-225N10.3-001) 182843521-182844619 processed_pseudogene
ENSG00000273261 (RP11-531F16.4)
 ENST00000608000 (RP11-531F16.4-001) 182921240-182921938 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0005FW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037400-ENSMUSG00000027708 CGP 10090 3:35754134-35937445
GeneTranscriptPositionBiotype
ENSMUSG00000027708 (Dcun1d1)
DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) 		ENSMUST00000108182 (Dcun1d1-001) 35892978-35932966 protein_coding
ENSMUST00000121632 (Dcun1d1-002) 35893506-35930074 protein_coding
ENSMUST00000123312 (Dcun1d1-007) 35909144-35932815 processed_transcript
ENSMUST00000128301 (Dcun1d1-005) 35897458-35932334 protein_coding
ENSMUST00000132052 (Dcun1d1-004) 35919001-35937439 protein_coding
ENSMUST00000145392 (Dcun1d1-008) 35897522-35909457 processed_transcript
ENSMUST00000148465 (Dcun1d1-003) 35897475-35937445 protein_coding
ENSMUST00000154069 (Dcun1d1-006) 35918998-35930119 protein_coding
ENSMUST00000178098 (Dcun1d1-201) 35892105-35932334 protein_coding
ENSMUSG00000037400 (Atp11b)
ATPase, class VI, type 11B 		ENSMUST00000029257 (Atp11b-001) 35754134-35856274 protein_coding
ENSMUST00000108186 (Atp11b-002) 35754134-35829688 protein_coding
ENSMUST00000125214 (Atp11b-004) 35838753-35856271 retained_intron
ENSMUST00000134260 (Atp11b-006) 35838721-35856271 retained_intron
ENSMUST00000138896 (Atp11b-007) 35807842-35810281 processed_transcript
ENSMUST00000141468 (Atp11b-005) 35789606-35856274 protein_coding
ENSMUST00000142037 (Atp11b-003) 35754134-35838280 retained_intron
ENSMUSG00000085655 (Gm15952)
predicted gene 15952 		ENSMUST00000122858 (Gm15952-001) 35933045-35942717 antisense
ENSMUST00000144542 (Gm15952-002) 35933057-35938048 antisense
ENSMUSG00000097713 (Gm7741)
predicted gene 7741 		ENSMUST00000181445 (Gm7741-001) 35863877-35864865 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005FW_0001ENSG00000043093ENST00000292782ENST00000460412ENST00000466812ENST00000469954ENST00000487822ENST00000492563ENST00000497606ENSG00000058063ENST00000323116ENST00000466758ENST00000475636ENST00000482070ENST00000482794ENST00000484691ENST00000490303ENST00000491699ENST00000493826ENST00000498086ENSG00000244346ENST00000460975ENSG00000270554ENST00000604149ENSG00000273261ENST00000608000CIL_0005FW_0002ENSMUSG00000027708ENSMUST00000108182ENSMUST00000121632ENSMUST00000123312ENSMUST00000128301ENSMUST00000132052ENSMUST00000145392ENSMUST00000148465ENSMUST00000154069ENSMUST00000178098ENSMUSG00000037400ENSMUST00000029257ENSMUST00000108186ENSMUST00000125214ENSMUST00000134260ENSMUST00000138896ENSMUST00000141468ENSMUST00000142037ENSMUSG00000085655ENSMUST00000122858ENSMUST00000144542ENSMUSG00000097713ENSMUST00000181445
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005FW_0001ENSG00000043093ENST00000292782ENST00000469954ENST00000492563ENST00000497606ENSG00000058063ENST00000323116ENST00000490303ENST00000491699ENST00000498086ENSG00000244346ENST00000460975ENSG00000270554ENST00000604149ENSG00000273261ENST00000608000CIL_0005FW_0002ENSMUSG00000027708ENSMUST00000108182ENSMUST00000121632ENSMUST00000123312ENSMUST00000128301ENSMUST00000148465ENSMUST00000178098ENSMUSG00000037400ENSMUST00000029257ENSMUST00000108186ENSMUST00000125214ENSMUST00000134260ENSMUST00000141468ENSMUST00000142037ENSMUSG00000085655ENSMUST00000122858ENSMUST00000144542ENSMUSG00000097713ENSMUST00000181445
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000043093 ENST00000292782 2.837±0.00 1.463±0.00 2.006±0.00 4.109±0.15 2.382±1.49 3.028±0.70 1.220±0.94 4.258±0.49 3.478±1.20 2.824±1.07 3.227±0.00 4.886±2.72 1.825±1.18 4.802±0.70
ENST00000460412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469954 N/A N/A N/A N/A N/A N/A 2.969±0.00 N/A N/A N/A N/A N/A 1.166±0.10 71.541±19.26
ENST00000487822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492563 N/A N/A 9.158±0.00 15.247±0.00 6.281±0.00 11.877±0.00 N/A 12.375±0.00 9.930±0.00 12.465±0.00 7.232±0.00 19.794±0.00 N/A N/A
ENST00000497606 N/A N/A 5.117±0.00 N/A 9.314±0.00 N/A N/A N/A 12.687±0.00 10.484±0.00 N/A 14.744±0.00 5.293±0.00 118.809±0.00
ENSG00000058063 ENST00000323116 N/A N/A N/A 1.720±0.48 5.701±1.70 5.831±0.00 N/A 2.415±0.00 N/A 4.288±2.50 1.857±0.00 6.460±3.47 0.877±0.17 3.763±0.00
ENST00000466758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475636 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490303 N/A N/A N/A N/A N/A N/A 1.823±0.00 N/A N/A N/A 0.807±0.00 10.896±0.00 0.978±0.00 N/A
ENST00000491699 N/A N/A 2.847±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 16.398±0.00 N/A N/A
ENST00000493826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498086 N/A 1.961±0.00 N/A N/A N/A N/A 1.227±0.00 N/A 4.678±0.00 N/A 0.660±0.00 N/A N/A 6.518±1.66
ENSG00000244346 ENST00000460975 0.023±0.00 0.370±0.00 N/A N/A 0.156±0.00 0.453±0.00 0.022±0.00 0.069±0.00 0.067±0.05 N/A N/A 0.183±0.06 0.083±0.00 0.105±0.04
ENSG00000270554 ENST00000604149 0.074±0.00 N/A 0.057±0.00 0.081±0.00 0.612±0.58 N/A 0.186±0.00 0.436±0.00 0.092±0.00 0.221±0.13 0.139±0.00 0.036±0.03 N/A 0.030±0.02
ENSG00000273261 ENST00000608000 N/A N/A N/A N/A N/A 6.418±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027708 ENSMUST00000108182 1.594±0.73 1.295±0.27 6.758±0.43 5.330±1.45 0.877±0.43 1.706±0.39 2.071±0.25 2.236±1.16 6.085±4.87 1.419±0.56 6.430±1.09 1.909±1.33 3.404±2.37 6.380±0.20
ENSMUST00000121632 1.629±0.20 1.762±0.48 N/A 1.606±0.46 1.824±0.42 2.034±0.87 1.346±0.14 1.792±0.45 3.546±1.17 2.119±0.51 N/A 2.756±0.90 2.047±0.49 10.443±3.42
ENSMUST00000123312 N/A N/A N/A 6.133±0.00 N/A N/A N/A N/A N/A N/A N/A 17.698±0.00 8.138±3.08 104.074±0.00
ENSMUST00000128301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.577±0.00 N/A
ENSMUST00000132052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 120.757±69.57
ENSMUST00000154069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000178098 N/A 1.771±0.24 1.318±0.29 1.351±0.53 0.483±0.27 N/A 0.520±0.02 0.979±0.16 2.306±1.17 N/A 1.284±0.17 1.575±0.76 1.114±0.48 N/A
ENSMUSG00000037400 ENSMUST00000029257 5.335±1.97 5.713±1.41 5.714±0.20 2.426±0.00 5.915±2.17 16.815±2.73 2.607±0.37 5.572±0.93 4.913±0.89 7.169±0.72 2.173±0.86 6.809±1.91 8.140±1.35 6.158±2.11
ENSMUST00000108186 N/A 3.383±0.71 N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.177±0.00 10.006±2.83 6.259±0.00
ENSMUST00000125214 5.629±0.75 N/A 11.746±0.12 9.137±0.00 3.414±0.47 6.572±0.00 1.745±0.28 4.699±0.86 5.468±3.15 4.848±0.66 2.115±0.50 4.099±0.75 8.849±1.00 8.380±1.50
ENSMUST00000134260 N/A N/A N/A 8.198±1.63 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141468 N/A N/A N/A 2.711±0.00 N/A N/A N/A N/A N/A N/A 0.983±0.18 3.349±0.63 3.824±0.38 1.956±0.00
ENSMUST00000142037 N/A 1.769±0.00 N/A N/A 0.929±0.00 3.409±0.00 N/A N/A N/A 1.268±0.00 0.791±0.14 1.967±0.00 1.608±0.59 N/A
ENSMUSG00000085655 ENSMUST00000122858 1.308±0.02 5.980±0.47 0.901±0.22 0.348±0.18 1.895±0.97 N/A 1.103±0.43 2.596±0.53 1.732±1.10 1.194±0.53 1.359±0.22 2.137±1.70 0.720±0.26 0.790±0.36
ENSMUST00000144542 0.381±0.01 N/A 0.300±0.10 0.183±0.08 N/A N/A 0.166±0.00 0.353±0.00 0.265±0.08 0.451±0.00 0.192±0.07 0.940±0.41 0.378±0.22 0.623±0.13
ENSMUSG00000097713 ENSMUST00000181445 0.050±0.01 0.138±0.05 0.044±0.00 0.067±0.03 0.111±0.05 0.145±0.05 0.030±0.00 0.041±0.02 0.041±0.05 0.139±0.08 N/A 0.212±0.06 0.048±0.02 0.240±0.10

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