C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, class VI, type 11B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000323116 ATP11B-001 ENSG00000058063 9606 + 3:182793500-182921635 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyLungMuscleOvaryPlacentaTestisENST00000323116
Transcript ID Brain Breast Colon Kidney Lung Muscle Ovary Placenta Testis
ENST00000323116 1.720±0.48 5.701±1.70 5.831±0.00 2.415±0.00 4.288±2.50 1.857±0.00 6.460±3.47 0.877±0.17 3.763±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005FX CIL_0005FX_0001 CGP 3:181711924-182921635
CIL_0007U2 CIL_0007U2_0001 VISTA 3:182208439-182810171
CIL_0005FW CIL_0005FW_0001 CGP 3:182793500-182985953

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000287 IEA magnesium ion binding
GO:0004012 TAS:IEA phospholipid-translocating ATPase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005637 NAS nuclear inner membrane
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005886 TAS plasma membrane
GO:0006811 NAS ion transport
GO:0008152 IEA metabolic process
GO:0015075 NAS ion transmembrane transporter activity
GO:0015914 IEA phospholipid transport
GO:0015917 TAS aminophospholipid transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0034220 TAS ion transmembrane transport
GO:0045332 NAS phospholipid translocation
GO:0046872 IEA metal ion binding
GO:0055037 IDA recycling endosome
GO:0055085 TAS transmembrane transport
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029257 Atp11b-001 protein_coding Mus_musculus 0 4809

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