C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, class VI, type 11B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029257 Atp11b-001 ENSMUSG00000037400 10090 + 3:35754134-35856274 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029257
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029257 5.335±1.97 5.713±1.41 5.714±0.20 2.426±0.00 5.915±2.17 16.815±2.73 2.607±0.37 5.572±0.93 4.913±0.89 7.169±0.72 2.173±0.86 6.809±1.91 8.140±1.35 6.158±2.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005FX CIL_0005FX_0002 CGP 3:34650405-35856274
CIL_0005FW CIL_0005FW_0002 CGP 3:35754134-35937445

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0004012 IEA phospholipid-translocating ATPase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005783 IEA endoplasmic reticulum
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0045332 IEA phospholipid translocation
GO:0055037 IEA recycling endosome
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000323116 ATP11B-001 protein_coding Homo_sapiens 0 4809
ENST00000466758 ATP11B-006 nonsense_mediated_decay Homo_sapiens 0 1112
ENST00000482070 ATP11B-009 protein_coding Homo_sapiens 0 529
ENST00000482794 ATP11B-010 processed_transcript Homo_sapiens 0 758
ENST00000490303 ATP11B-005 retained_intron Homo_sapiens 0 2732
ENST00000491699 ATP11B-007 protein_coding Homo_sapiens 0 475
ENST00000493826 ATP11B-002 protein_coding Homo_sapiens 0 917
ENST00000498086 ATP11B-004 protein_coding Homo_sapiens 0 3570

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