C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005IJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000077045-ENSDARG00000090720 CGP 7955 19:49406876-49412023
GeneTranscriptPositionBiotype
ENSDARG00000077045 (scg5)
secretogranin V 		ENSDART00000114886 (scg5-201) 49406876-49410005 protein_coding
CIL_0005IJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166922-ENSG00000166923 CGP 9606 15:32641676-32745107
GeneTranscriptPositionBiotype
ENSG00000166922 (SCG5)
secretogranin V (7B2 protein) 		ENST00000300175 (SCG5-001) 32641676-32697098 protein_coding
ENST00000413748 (SCG5-002) 32641676-32697098 protein_coding
ENST00000470349 (SCG5-006) 32673055-32691763 processed_transcript
ENST00000471027 (SCG5-009) 32643623-32691909 protein_coding
ENST00000475752 (SCG5-008) 32684440-32697096 retained_intron
ENST00000494364 (SCG5-004) 32641699-32697088 protein_coding
ENST00000497208 (SCG5-003) 32641702-32696889 protein_coding
ENST00000498069 (SCG5-005) 32677560-32696626 processed_transcript
ENST00000498607 (SCG5-007) 32684416-32692308 retained_intron
ENSG00000166923 (GREM1)
gremlin 1, DAN family BMP antagonist 		ENST00000560677 (GREM1-005) 32718004-32731275 protein_coding
ENST00000560830 (GREM1-002) 32718004-32733302 protein_coding
ENST00000622074 (GREM1-001) 32717974-32745107 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005IJ_0001ENSDARG00000077045ENSDART00000114886CIL_0005IJ_0002ENSG00000166922ENST00000300175ENST00000413748ENST00000470349ENST00000471027ENST00000475752ENST00000494364ENST00000497208ENST00000498069ENST00000498607ENSG00000166923ENST00000560677ENST00000560830ENST00000622074
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005IJ_0001ENSDARG00000077045ENSDART00000114886CIL_0005IJ_0002ENSG00000166922ENST00000300175ENST00000413748ENST00000470349ENST00000471027ENST00000475752ENST00000494364ENST00000497208ENST00000498069ENST00000498607ENSG00000166923ENST00000560677ENST00000560830ENST00000622074
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000077045 ENSDART00000114886 N/A N/A N/A 0.609±0.27 N/A N/A 0.979±0.62 N/A N/A N/A 0.071±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166922 ENST00000300175 N/A N/A N/A 24.985±12.69 N/A 2.061±0.00 N/A N/A N/A N/A N/A 1.852±0.83 N/A 3.158±1.63
ENST00000413748 N/A N/A N/A 61.558±31.91 0.154±0.00 0.568±0.14 N/A N/A N/A N/A N/A 3.602±4.04 0.499±0.00 4.510±0.00
ENST00000470349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.247±0.09 6.416±0.00
ENST00000471027 N/A N/A N/A N/A N/A 0.397±0.00 0.058±0.00 N/A N/A N/A 0.024±0.00 N/A 0.196±0.06 N/A
ENST00000475752 2.636±0.00 0.187±0.00 N/A 14.073±0.00 0.115±0.00 0.626±0.00 N/A 0.887±0.00 0.136±0.00 N/A N/A N/A 0.100±0.00 1.995±0.00
ENST00000494364 N/A N/A N/A N/A 0.164±0.00 0.468±0.20 N/A 0.516±0.00 0.339±0.00 0.395±0.00 N/A N/A N/A N/A
ENST00000497208 N/A 0.056±0.00 N/A N/A 0.520±0.00 N/A N/A N/A 0.340±0.00 N/A N/A N/A 0.187±0.00 N/A
ENST00000498069 N/A N/A N/A N/A N/A N/A 0.151±0.00 N/A 0.629±0.00 0.350±0.00 N/A 0.905±0.00 N/A N/A
ENST00000498607 0.717±0.00 0.052±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166923 ENST00000560677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.483±1.16 N/A N/A N/A
ENST00000560830 13.262±0.00 14.416±0.00 0.959±0.00 4.028±2.37 17.026±16.48 30.153±25.95 0.105±0.08 1.021±0.86 0.958±0.32 0.753±0.36 1.099±0.00 8.335±6.17 0.206±0.04 0.881±0.48
ENST00000622074 1.531±0.00 3.238±0.00 0.028±0.00 0.676±0.56 1.558±1.38 5.048±4.71 0.020±0.02 0.209±0.19 0.119±0.04 0.099±0.07 0.020±0.00 0.852±0.53 0.037±0.02 0.159±0.12

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