C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: secretogranin V (7B2 protein)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000475752 SCG5-008 ENSG00000166922 9606 + 15:32684440-32697096 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverPlacentaTestisENST00000475752
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Placenta Testis
ENST00000475752 2.636±0.00 0.187±0.00 14.073±0.00 0.115±0.00 0.626±0.00 0.887±0.00 0.136±0.00 0.100±0.00 1.995±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097N CIL_00097N_0001 VISTA 15:32499326-33100458
CIL_0005IJ CIL_0005IJ_0002 CGP 15:32641676-32745107

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024005 Scg5-001 protein_coding Mus_musculus 0 424
ENSDART00000114886 scg5-201 protein_coding Danio_rerio 1e-25 121
ENSDART00000152906 scg5-002 protein_coding Danio_rerio 1e-25 121
ENSDART00000045249 scg5-001 protein_coding Danio_rerio 1e-25 121
ENSDART00000153237 scg5-003 retained_intron Danio_rerio 4e-16 90

Loading