C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005N1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000170915-ENSG00000096093 CGP 9606 6:52361421-52495785
GeneTranscriptPositionBiotype
ENSG00000096093 (EFHC1)
EF-hand domain (C-terminal) containing 1
ENST00000371068 (EFHC1-001) 52420308-52495785 protein_coding
ENST00000480623 (EFHC1-002) 52420308-52492500 nonsense_mediated_decay
ENST00000481466 (EFHC1-004) 52488557-52492546 processed_transcript
ENST00000491749 (EFHC1-003) 52420362-52438556 processed_transcript
ENST00000538167 (EFHC1-201) 52423809-52495783 protein_coding
ENSG00000170915 (PAQR8)
progestin and adipoQ receptor family member VIII
ENST00000360726 (PAQR8-002) 52362446-52407691 protein_coding
ENST00000442253 (PAQR8-001) 52362128-52407777 protein_coding
ENST00000512121 (PAQR8-003) 52361421-52403549 protein_coding
CIL_0005N1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025931-ENSMUSG00000041809 CGP 10090 1:20890606-20990841
GeneTranscriptPositionBiotype
ENSMUSG00000025931 (Paqr8)
progestin and adipoQ receptor family member VIII
ENSMUST00000068880 (Paqr8-002) 20917840-20939055 protein_coding
ENSMUST00000167119 (Paqr8-201) 20917874-20935749 protein_coding
ENSMUST00000187651 (Paqr8-003) 20922259-20935756 protein_coding
ENSMUST00000189400 (Paqr8-001) 20890606-20939650 protein_coding
ENSMUSG00000041809 (Efhc1)
EF-hand domain (C-terminal) containing 1
ENSMUST00000038447 (Efhc1-001) 20951688-20990841 protein_coding
ENSMUST00000160782 (Efhc1-002) 20951626-20955527 processed_transcript
ENSMUSG00000077314 (Gm24171)
predicted gene, 24171
ENSMUST00000104126 (Gm24171-201) 20915410-20915540 snoRNA
ENSMUSG00000100929 (RP23-191A12.6)
predicted gene 28064
ENSMUST00000185639 (RP23-191A12.6-001) 20945711-20946914 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005N1_0001ENSG00000096093ENST00000371068ENST00000480623ENST00000481466ENST00000491749ENST00000538167ENSG00000170915ENST00000360726ENST00000442253ENST00000512121CIL_0005N1_0002ENSMUSG00000025931ENSMUST00000068880ENSMUST00000167119ENSMUST00000187651ENSMUST00000189400ENSMUSG00000041809ENSMUST00000038447ENSMUST00000160782ENSMUSG00000077314ENSMUST00000104126ENSMUSG00000100929ENSMUST00000185639
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005N1_0001ENSG00000096093ENST00000371068ENST00000480623ENST00000481466ENST00000538167ENSG00000170915ENST00000360726ENST00000442253CIL_0005N1_0002ENSMUSG00000025931ENSMUST00000068880ENSMUST00000167119ENSMUST00000187651ENSMUST00000189400ENSMUSG00000041809ENSMUST00000038447ENSMUST00000160782ENSMUSG00000077314ENSMUST00000104126ENSMUSG00000100929ENSMUST00000185639
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000096093 ENST00000371068 N/A 0.139±0.00 N/A N/A N/A 0.099±0.00 N/A 0.807±0.00 0.097±0.00 1.056±0.00 N/A 1.583±1.22 0.161±0.07 N/A
ENST00000480623 0.310±0.00 0.516±0.00 0.716±0.00 0.598±0.00 0.471±0.14 0.493±0.04 0.421±0.00 0.674±0.51 0.299±0.05 1.171±0.48 0.237±0.00 2.087±0.26 0.516±0.09 6.885±0.87
ENST00000481466 1.040±0.00 N/A N/A N/A 1.590±0.00 N/A N/A N/A 0.432±0.00 N/A N/A N/A N/A 9.085±0.00
ENST00000491749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538167 N/A 0.393±0.00 N/A N/A N/A 0.092±0.00 0.123±0.00 N/A 0.097±0.00 1.818±0.00 0.051±0.00 N/A 0.124±0.00 1.580±0.14
ENSG00000170915 ENST00000360726 1.426±0.00 0.226±0.00 N/A 12.322±10.51 0.295±0.00 2.176±0.66 0.336±0.15 0.541±0.24 0.058±0.00 1.816±0.00 0.010±0.00 4.902±2.96 3.381±0.93 2.171±0.00
ENST00000442253 0.330±0.00 1.559±0.00 0.887±0.00 8.980±0.00 1.112±0.59 1.203±0.35 0.538±0.00 2.494±0.00 0.223±0.11 N/A 0.091±0.00 2.904±0.99 3.178±0.00 3.273±0.00
ENST00000512121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025931 ENSMUST00000068880 0.357±0.11 6.698±0.00 2.009±0.20 5.547±3.81 0.316±0.03 N/A 0.226±0.02 0.151±0.04 0.083±0.03 N/A 0.069±0.03 2.751±0.40 0.886±0.54 4.024±0.83
ENSMUST00000167119 1.160±0.00 16.352±6.97 N/A N/A 1.829±0.48 9.974±3.77 N/A 0.649±0.25 0.193±0.13 12.624±5.10 N/A 16.136±6.64 N/A N/A
ENSMUST00000187651 2.136±0.59 39.768±9.73 N/A 5.904±1.36 0.768±0.46 4.432±1.27 0.629±0.14 0.621±0.16 0.161±0.12 6.206±0.00 0.091±0.00 17.032±6.15 0.414±0.00 9.715±0.95
ENSMUST00000189400 1.012±0.55 8.260±3.08 2.957±0.33 4.456±0.77 0.354±0.08 3.781±0.17 0.167±0.10 0.253±0.05 0.076±0.05 6.122±1.21 0.094±0.03 4.526±1.63 0.884±0.34 1.074±0.40
ENSMUSG00000041809 ENSMUST00000038447 0.860±0.03 0.322±0.10 1.133±0.11 0.912±0.22 0.587±0.27 0.360±0.21 0.414±0.12 0.262±0.04 0.111±0.06 2.968±0.69 0.078±0.03 4.411±2.30 1.700±1.41 95.165±26.25
ENSMUST00000160782 N/A 0.590±0.23 N/A N/A 0.628±0.00 0.528±0.14 N/A 0.335±0.00 0.486±0.29 5.231±0.22 0.253±0.00 14.347±6.85 N/A 140.925±1.42
ENSMUSG00000077314 ENSMUST00000104126 N/A N/A N/A 5.624±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000100929 ENSMUST00000185639 0.082±0.00 N/A 0.044±0.02 N/A N/A N/A N/A N/A N/A 0.143±0.00 N/A 0.048±0.00 0.008±0.00 0.047±0.00

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