C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: EF-hand domain (C-terminal) containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000538167 EFHC1-201 ENSG00000096093 9606 + 6:52423809-52495783 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonHeartLiverLungMusclePlacentaTestisENST00000538167
Transcript ID Adrenal Colon Heart Liver Lung Muscle Placenta Testis
ENST00000538167 0.393±0.00 0.092±0.00 0.123±0.00 0.097±0.00 1.818±0.00 0.051±0.00 0.124±0.00 1.580±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081C CIL_00081C_0001 VISTA 6:52088930-52691414
CIL_0005N1 CIL_0005N1_0001 CGP 6:52361421-52495785
CIL_0005N7 CIL_0005N7_0001 CGP 6:52420308-52576915

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005930 ISS axoneme
GO:0008022 ISS protein C-terminus binding
GO:0043025 ISS neuronal cell body

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038447 Efhc1-001 protein_coding Mus_musculus 0 1700

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