C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005NW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000167088-ENSG00000158201 CGP 9606 18:21612267-21704805
GeneTranscriptPositionBiotype
ENSG00000158201 (ABHD3)
abhydrolase domain containing 3 		ENST00000289119 (ABHD3-001) 21650897-21704805 protein_coding
ENST00000577564 (ABHD3-008) 21651693-21664534 retained_intron
ENST00000577891 (ABHD3-004) 21659180-21704774 nonsense_mediated_decay
ENST00000577928 (ABHD3-010) 21683781-21704575 retained_intron
ENST00000578270 (ABHD3-002) 21651097-21703825 protein_coding
ENST00000579875 (ABHD3-006) 21663850-21704640 processed_transcript
ENST00000579982 (ABHD3-005) 21701276-21704780 retained_intron
ENST00000580477 (ABHD3-009) 21654889-21656956 protein_coding
ENST00000580981 (ABHD3-003) 21650928-21704767 protein_coding
ENST00000584464 (ABHD3-007) 21682900-21703688 protein_coding
ENSG00000167088 (SNRPD1)
small nuclear ribonucleoprotein D1 polypeptide 16kDa 		ENST00000300413 (SNRPD1-001) 21612267-21630456 protein_coding
ENST00000579618 (SNRPD1-003) 21612314-21629109 protein_coding
ENST00000582475 (SNRPD1-002) 21612331-21629479 protein_coding
ENSG00000264188 (RP11-13N13.5)
 ENST00000584148 (RP11-13N13.5-001) 21661787-21662395 sense_intronic
ENSG00000265656 (RP11-13N13.6)
 ENST00000578583 (RP11-13N13.6-001) 21673628-21682561 antisense
CIL_0005NW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000002477-ENSMUSG00000002475 CGP 10090 18:10617796-10706771
GeneTranscriptPositionBiotype
ENSMUSG00000002475 (Abhd3)
abhydrolase domain containing 3 		ENSMUST00000002549 (Abhd3-201) 10644413-10706696 protein_coding
ENSMUST00000117726 (Abhd3-002) 10644413-10706713 protein_coding
ENSMUST00000117828 (Abhd3-001) 10644411-10706771 protein_coding
ENSMUST00000144150 (Abhd3-003) 10644413-10658789 protein_coding
ENSMUSG00000002477 (Snrpd1)
small nuclear ribonucleoprotein D1 		ENSMUST00000002551 (Snrpd1-201) 10617796-10628230 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005NW_0001ENSG00000158201ENST00000289119ENST00000577564ENST00000577891ENST00000577928ENST00000578270ENST00000579875ENST00000579982ENST00000580477ENST00000580981ENST00000584464ENSG00000167088ENST00000300413ENST00000579618ENST00000582475ENSG00000264188ENST00000584148ENSG00000265656ENST00000578583CIL_0005NW_0002ENSMUSG00000002475ENSMUST00000002549ENSMUST00000117726ENSMUST00000117828ENSMUST00000144150ENSMUSG00000002477ENSMUST00000002551
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005NW_0001ENSG00000158201ENST00000289119ENST00000577564ENST00000577891ENST00000577928ENST00000578270ENST00000579875ENST00000579982ENST00000580981ENSG00000167088ENST00000300413ENST00000579618ENST00000582475ENSG00000264188ENST00000584148ENSG00000265656ENST00000578583CIL_0005NW_0002ENSMUSG00000002475ENSMUST00000002549ENSMUST00000117726ENSMUST00000117828ENSMUST00000144150ENSMUSG00000002477ENSMUST00000002551
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000158201 ENST00000289119 N/A 1.611±0.00 0.195±0.00 2.144±0.00 1.610±1.00 1.797±0.00 0.384±0.29 7.282±0.00 11.102±0.00 1.645±0.00 N/A 1.873±0.92 2.640±0.38 2.163±0.00
ENST00000577564 N/A N/A N/A 0.732±0.00 N/A N/A 0.685±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000577891 N/A N/A 0.110±0.00 N/A N/A N/A 0.277±0.00 N/A 0.569±0.00 N/A 3.168±0.00 N/A N/A N/A
ENST00000577928 N/A N/A N/A 2.083±0.00 N/A N/A N/A 3.688±0.00 0.849±0.00 N/A N/A 2.004±0.00 N/A N/A
ENST00000578270 N/A 0.402±0.00 N/A N/A 2.073±0.00 0.696±0.00 0.203±0.00 1.191±0.00 N/A 2.779±0.00 0.676±0.00 2.027±1.01 N/A 1.123±0.00
ENST00000579875 N/A N/A N/A N/A N/A N/A N/A 1.061±0.00 N/A N/A N/A 2.437±0.84 1.457±0.00 N/A
ENST00000579982 N/A N/A N/A N/A 0.941±0.00 N/A N/A N/A 0.171±0.00 N/A N/A N/A N/A N/A
ENST00000580477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580981 0.814±0.00 N/A N/A N/A N/A 0.959±0.00 0.447±0.00 N/A N/A 2.156±0.00 N/A 1.724±0.00 0.720±0.00 N/A
ENST00000584464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000167088 ENST00000300413 2.818±0.00 6.435±0.00 N/A 5.605±0.11 2.060±0.29 2.457±0.04 1.345±0.69 2.548±1.05 1.993±0.00 1.393±0.18 1.388±0.33 13.995±11.30 16.300±11.05 17.267±11.21
ENST00000579618 5.905±0.00 N/A 5.297±0.00 N/A 6.897±0.03 11.723±0.00 3.022±0.94 10.963±0.00 9.019±2.95 7.338±4.39 5.869±0.00 23.989±18.02 28.131±6.94 24.745±5.76
ENST00000582475 6.653±0.00 13.199±0.00 1.480±0.00 3.998±1.90 4.452±0.00 5.313±2.74 1.328±0.96 5.575±0.00 3.016±1.73 3.674±0.00 1.409±0.00 12.404±0.00 13.609±1.56 12.065±0.00
ENSG00000264188 ENST00000584148 0.532±0.00 3.340±0.00 N/A 1.722±0.00 1.546±0.00 1.228±0.00 0.415±0.00 0.858±0.00 0.506±0.00 1.593±0.00 N/A 0.444±0.29 0.203±0.00 0.742±0.59
ENSG00000265656 ENST00000578583 N/A N/A 0.235±0.00 0.089±0.00 0.105±0.00 N/A 0.109±0.00 0.389±0.22 0.024±0.00 0.112±0.00 0.380±0.00 0.422±0.23 N/A 0.283±0.23
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002475 ENSMUST00000002549 N/A N/A 0.321±0.00 14.564±0.00 3.756±0.00 N/A 0.983±0.00 N/A 6.748±5.76 N/A 0.195±0.06 7.263±1.25 7.553±2.97 2.342±0.00
ENSMUST00000117726 1.043±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.089±0.02 1.326±0.00 N/A N/A
ENSMUST00000117828 3.476±0.55 43.253±21.68 0.769±0.15 1.692±1.35 3.782±0.37 2.797±0.63 1.568±0.10 26.507±3.06 19.349±13.33 2.874±0.94 N/A 10.019±3.06 7.849±4.45 2.261±0.95
ENSMUST00000144150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.079±0.04 N/A 5.621±0.00 N/A
ENSMUSG00000002477 ENSMUST00000002551 8.659±3.73 1.646±0.59 10.906±4.60 26.792±0.66 3.795±1.81 2.724±1.05 4.109±0.50 6.834±1.36 28.683±30.47 6.008±1.20 7.006±0.51 14.596±17.12 72.193±38.37 17.078±11.38

Loading