C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small nuclear ribonucleoprotein D1 polypeptide 16kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000582475 SNRPD1-002 ENSG00000167088 9606 + 18:21612331-21629479 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000582475
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000582475 6.653±0.00 13.199±0.00 1.480±0.00 3.998±1.90 4.452±0.00 5.313±2.74 1.328±0.96 5.575±0.00 3.016±1.73 3.674±0.00 1.409±0.00 12.404±0.00 13.609±1.56 12.065±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084R CIL_00084R_0001 VISTA 18:21458991-22061961
CIL_0005CM CIL_0005CM_0001 CGP 18:21529281-21630456
CIL_0005NW CIL_0005NW_0001 CGP 18:21612267-21704805

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000002551 Snrpd1-201 protein_coding Mus_musculus 0 505
ENSMUST00000121195 Gm14277-001 processed_pseudogene Mus_musculus 0 385

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