C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lactate dehydrogenase B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396075 LDHB-004 ENSG00000111716 9606 - 12:21638368-21657362 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000396075
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000396075 181.643±0.00 229.412±0.00 31.681±0.00 52.622±0.00 224.255±0.00 17.664±0.00 94.590±0.00 53.825±0.00 56.153±0.00 110.262±5.97 113.863±0.00 32.405±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005PS CIL_0005PS_0001 CGP 12:21536189-21757857
CIL_00090B CIL_00090B_0001 VISTA 12:21591137-22192666
CIL_0005PV CIL_0005PV_0001 CGP 12:21635342-21775581

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004459 IEA L-lactate dehydrogenase activity
GO:0005975 IEA carbohydrate metabolic process
GO:0006096 IEA glycolytic process
GO:0016491 IEA oxidoreductase activity
GO:0016616 IEA oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0044262 IEA cellular carbohydrate metabolic process
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032373 Ldhb-001 protein_coding Mus_musculus 0 782
ENSMUST00000134191 Ldhb-003 protein_coding Mus_musculus 0 658

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