C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lactate dehydrogenase B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000350669 LDHB-001 ENSG00000111716 9606 - 12:21635342-21657842 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000350669
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000350669 311.437±0.00 178.892±0.00 39.453±0.00 247.707±176.51 180.697±171.95 111.846±98.64 363.314±299.62 320.387±319.34 10.663±3.93 61.969±47.82 51.057±0.00 166.786±78.35 135.413±51.44 114.370±70.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005PS CIL_0005PS_0001 CGP 12:21536189-21757857
CIL_00090B CIL_00090B_0001 VISTA 12:21591137-22192666
CIL_0005PV CIL_0005PV_0001 CGP 12:21635342-21775581

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004459 IEA L-lactate dehydrogenase activity
GO:0005515 IPI protein binding
GO:0005737 IDA:IEA cytoplasm
GO:0005829 TAS cytosol
GO:0005975 IEA carbohydrate metabolic process
GO:0006090 TAS pyruvate metabolic process
GO:0006096 IEA glycolytic process
GO:0016020 IDA membrane
GO:0016491 IEA oxidoreductase activity
GO:0016616 IEA oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0044237 TAS cellular metabolic process
GO:0044262 IEA cellular carbohydrate metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032373 Ldhb-001 protein_coding Mus_musculus 0 1184
ENSMUST00000134191 Ldhb-003 protein_coding Mus_musculus 0 658

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