C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005RO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000134109-ENSG00000196277 CGP 9606 3:5187646-7741533
GeneTranscriptPositionBiotype
ENSG00000134109 (EDEM1)
ER degradation enhancer, mannosidase alpha-like 1 		ENST00000256497 (EDEM1-001) 5187673-5219957 protein_coding
ENST00000434243 (EDEM1-004) 5187646-5208172 nonsense_mediated_decay
ENST00000443790 (EDEM1-007) 5187764-5189583 nonsense_mediated_decay
ENST00000445686 (EDEM1-003) 5188349-5211298 protein_coding
ENST00000465187 (EDEM1-005) 5187806-5195284 retained_intron
ENST00000465369 (EDEM1-002) 5187720-5211406 retained_intron
ENST00000492751 (EDEM1-006) 5195106-5201779 retained_intron
ENSG00000189229 (AC069277.2)
 ENST00000342990 (AC069277.2-004) 6507781-6694798 lincRNA
ENST00000414438 (AC069277.2-006) 6490734-6584090 lincRNA
ENST00000414603 (AC069277.2-007) 6490803-6557959 lincRNA
ENST00000432743 (AC069277.2-001) 6694723-6697870 lincRNA
ENST00000433639 (AC069277.2-005) 6490479-6736129 lincRNA
ENSG00000196277 (GRM7)
glutamate receptor, metabotropic 7 		ENST00000357716 (GRM7-001) 6861115-7741511 protein_coding
ENST00000389335 (GRM7-004) 6861240-7693686 nonsense_mediated_decay
ENST00000389336 (GRM7-003) 6861240-7693686 protein_coding
ENST00000402647 (GRM7-201) 7146446-7693670 protein_coding
ENST00000435689 (GRM7-007) 6862743-7306652 nonsense_mediated_decay
ENST00000440923 (GRM7-002) 6861240-7693686 nonsense_mediated_decay
ENST00000443259 (GRM7-011) 6770001-7146656 nonsense_mediated_decay
ENST00000445087 (GRM7-009) 7403050-7578490 protein_coding
ENST00000448328 (GRM7-012) 6770069-7306609 protein_coding
ENST00000458641 (GRM7-005) 7451781-7636441 processed_transcript
ENST00000461677 (GRM7-008) 7298577-7415164 retained_intron
ENST00000463676 (GRM7-006) 7298683-7682335 retained_intron
ENST00000467425 (GRM7-013) 6861115-7693670 nonsense_mediated_decay
ENST00000471242 (GRM7-010) 7693633-7694463 processed_transcript
ENST00000486284 (GRM7-015) 6861115-7741533 protein_coding
ENSG00000223719 (AC024162.2)
 ENST00000454211 (AC024162.2-001) 6692319-6693088 processed_pseudogene
ENSG00000226022 (AC026167.1)
 ENST00000435651 (AC026167.1-001) 6148484-6365885 lincRNA
ENSG00000226258 (GRM7-AS3)
GRM7 antisense RNA 3 		ENST00000412629 (GRM7-AS3-003) 6632358-6805449 lincRNA
ENST00000417482 (GRM7-AS3-006) 6731172-6805438 lincRNA
ENST00000424366 (GRM7-AS3-007) 6739538-6805427 lincRNA
ENST00000445675 (GRM7-AS3-001) 6631900-6664906 lincRNA
ENST00000449158 (GRM7-AS3-005) 6721315-6791105 lincRNA
ENST00000452244 (GRM7-AS3-008) 6740367-6742687 lincRNA
ENST00000454410 (GRM7-AS3-009) 6788934-6805409 lincRNA
ENST00000455623 (GRM7-AS3-002) 6631689-6644894 lincRNA
ENST00000458713 (GRM7-AS3-004) 6632536-6664943 lincRNA
ENSG00000229642 (AC027119.1)
 ENST00000425894 (AC027119.1-001) 5962842-6124120 lincRNA
ENSG00000230944 (AC026202.5)
 ENST00000443087 (AC026202.5-001) 5255535-5256761 lincRNA
ENSG00000236152 (MRPS36P1)
mitochondrial ribosomal protein S36 pseudogene 1 		ENST00000421291 (MRPS36P1-001) 6773037-6773343 processed_pseudogene
ENSG00000236202 (GRM7-AS1)
GRM7 antisense RNA 1 		ENST00000420230 (GRM7-AS1-001) 7519741-7535284 antisense
ENST00000427273 (GRM7-AS1-002) 7520138-7560333 antisense
ENSG00000237665 (GRM7-AS2)
GRM7 antisense RNA 2 		ENST00000427748 (GRM7-AS2-001) 6892632-6894022 antisense
ENSG00000241227 (RN7SL553P)
RNA, 7SL, cytoplasmic 553, pseudogene 		ENST00000482215 (RN7SL553P-201) 5252926-5253223 misc_RNA
ENSG00000270207 (RP11-157E16.1)
 ENST00000604028 (RP11-157E16.1-001) 7606890-7607897 antisense
CIL_0005RO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030104-ENSMUSG00000056755 CGP 10090 6:108828641-111567230
GeneTranscriptPositionBiotype
ENSMUSG00000030104 (Edem1)
ER degradation enhancer, mannosidase alpha-like 1 		ENSMUST00000089162 (Edem1-201) 108828641-108859356 protein_coding
ENSMUSG00000056755 (Grm7)
glutamate receptor, metabotropic 7 		ENSMUST00000071076 (Grm7-003) 110645581-111566067 protein_coding
ENSMUST00000172951 (Grm7-001) 110645582-111567230 protein_coding
ENSMUST00000173001 (Grm7-004) 111495715-111499933 protein_coding
ENSMUST00000174018 (Grm7-002) 110645581-111497090 nonsense_mediated_decay
ENSMUST00000174310 (Grm7-005) 111495744-111502284 protein_coding
ENSMUSG00000092448 (Gm20387)
predicted gene 20387 		ENSMUST00000173609 (Gm20387-001) 110639753-110645916 processed_transcript
ENSMUSG00000092603 (Gm20386)
predicted gene 20386 		ENSMUST00000174010 (Gm20386-001) 110738350-110738481 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005RO_0001ENSG00000134109ENST00000256497ENST00000434243ENST00000443790ENST00000445686ENST00000465187ENST00000465369ENST00000492751ENSG00000189229ENST00000342990ENST00000414438ENST00000414603ENST00000432743ENST00000433639ENSG00000196277ENST00000357716ENST00000389335ENST00000389336ENST00000402647ENST00000435689ENST00000440923ENST00000443259ENST00000445087ENST00000448328ENST00000458641ENST00000461677ENST00000463676ENST00000467425ENST00000471242ENST00000486284ENSG00000223719ENST00000454211ENSG00000226022ENST00000435651ENSG00000226258ENST00000412629ENST00000417482ENST00000424366ENST00000445675ENST00000449158ENST00000452244ENST00000454410ENST00000455623ENST00000458713ENSG00000229642ENST00000425894ENSG00000230944ENST00000443087ENSG00000236152ENST00000421291ENSG00000236202ENST00000420230ENST00000427273ENSG00000237665ENST00000427748ENSG00000241227ENST00000482215ENSG00000270207ENST00000604028CIL_0005RO_0002ENSMUSG00000030104ENSMUST00000089162ENSMUSG00000056755ENSMUST00000071076ENSMUST00000172951ENSMUST00000173001ENSMUST00000174018ENSMUST00000174310ENSMUSG00000092448ENSMUST00000173609ENSMUSG00000092603ENSMUST00000174010
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005RO_0001ENSG00000134109ENST00000256497ENST00000465369ENST00000492751ENSG00000189229ENST00000342990ENST00000414438ENST00000414603ENST00000432743ENST00000433639ENSG00000196277ENST00000357716ENST00000389335ENST00000389336ENST00000402647ENST00000445087ENST00000448328ENST00000458641ENST00000461677ENST00000463676ENST00000486284ENSG00000223719ENST00000454211ENSG00000226022ENST00000435651ENSG00000226258ENST00000412629ENST00000445675ENST00000449158ENST00000455623ENST00000458713ENSG00000229642ENST00000425894ENSG00000230944ENST00000443087ENSG00000236152ENST00000421291ENSG00000236202ENST00000420230ENST00000427273ENSG00000237665ENST00000427748ENSG00000241227ENST00000482215ENSG00000270207ENST00000604028CIL_0005RO_0002ENSMUSG00000030104ENSMUST00000089162ENSMUSG00000056755ENSMUST00000071076ENSMUST00000172951ENSMUST00000174018ENSMUSG00000092448ENSMUST00000173609ENSMUSG00000092603ENSMUST00000174010
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000134109 ENST00000256497 5.572±0.00 6.248±0.00 N/A 0.897±0.71 6.293±0.00 1.615±0.86 0.971±0.74 6.078±0.00 15.418±0.00 8.350±0.00 1.023±0.78 2.829±2.44 1.942±0.75 2.708±1.47
ENST00000434243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465369 N/A N/A N/A N/A N/A N/A 0.506±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000492751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.517±0.00 N/A N/A N/A
ENSG00000189229 ENST00000342990 0.289±0.00 0.396±0.00 N/A N/A N/A 0.279±0.00 0.095±0.00 N/A 0.092±0.00 N/A N/A N/A 0.318±0.00 N/A
ENST00000414438 0.142±0.00 0.046±0.00 0.424±0.00 0.156±0.08 0.239±0.21 0.361±0.35 0.244±0.20 0.015±0.00 0.769±0.00 0.560±0.00 N/A 0.216±0.30 0.059±0.00 0.109±0.08
ENST00000414603 N/A N/A N/A N/A 0.143±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.078±0.00
ENST00000432743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.078±0.00 0.179±0.00
ENST00000433639 N/A N/A N/A 0.010±0.00 N/A 0.237±0.00 N/A 0.051±0.00 N/A 0.114±0.00 N/A 0.039±0.00 0.191±0.11 0.197±0.00
ENSG00000196277 ENST00000357716 0.220±0.00 N/A N/A 1.385±0.46 0.044±0.02 0.069±0.00 N/A N/A 0.003±0.00 0.041±0.02 N/A N/A N/A N/A
ENST00000389335 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.055±0.00 N/A 0.061±0.00 N/A N/A
ENST00000389336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.016±0.00 N/A
ENST00000402647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.152±0.04 N/A 0.144±0.00
ENST00000435689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443259 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445087 N/A N/A N/A N/A N/A N/A N/A N/A 0.394±0.00 N/A N/A N/A 0.026±0.00 1.409±0.00
ENST00000448328 N/A N/A N/A N/A N/A N/A N/A N/A 0.557±0.00 N/A N/A 0.984±0.00 N/A N/A
ENST00000458641 N/A 0.064±0.00 N/A N/A N/A N/A N/A N/A 0.007±0.00 N/A N/A N/A 0.021±0.00 N/A
ENST00000461677 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.225±0.00 N/A N/A N/A N/A
ENST00000463676 0.046±0.00 0.037±0.00 N/A 0.438±0.00 0.025±0.00 0.025±0.00 N/A 0.012±0.00 0.017±0.01 0.157±0.13 0.003±0.00 N/A N/A N/A
ENST00000467425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471242 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486284 N/A N/A N/A 1.145±0.31 N/A N/A N/A N/A N/A N/A N/A 0.036±0.00 N/A N/A
ENSG00000223719 ENST00000454211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.138±0.00
ENSG00000226022 ENST00000435651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.217±0.00 0.206±0.00
ENSG00000226258 ENST00000412629 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.324±0.30
ENST00000417482 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445675 N/A N/A N/A N/A N/A N/A N/A 0.026±0.00 N/A N/A N/A N/A N/A N/A
ENST00000449158 N/A N/A N/A N/A N/A N/A N/A 0.107±0.00 N/A N/A N/A N/A N/A N/A
ENST00000452244 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455623 N/A N/A 0.062±0.00 N/A 0.358±0.00 N/A N/A N/A N/A N/A N/A 0.268±0.00 N/A N/A
ENST00000458713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.134±0.00 N/A
ENSG00000229642 ENST00000425894 N/A N/A N/A 0.123±0.00 0.182±0.00 N/A N/A N/A N/A N/A N/A N/A 0.340±0.08 0.471±0.07
ENSG00000230944 ENST00000443087 N/A N/A N/A 0.024±0.00 N/A 0.297±0.00 N/A N/A N/A N/A N/A N/A N/A 0.234±0.00
ENSG00000236152 ENST00000421291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.073±0.00
ENSG00000236202 ENST00000420230 0.072±0.00 N/A N/A 0.128±0.00 N/A N/A N/A N/A N/A N/A N/A 0.095±0.00 N/A N/A
ENST00000427273 N/A N/A N/A 0.095±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.329±0.00
ENSG00000237665 ENST00000427748 N/A N/A N/A 0.761±0.74 0.217±0.00 0.289±0.00 N/A N/A N/A N/A N/A N/A N/A 0.117±0.00
ENSG00000241227 ENST00000482215 N/A 0.182±0.00 N/A 0.132±0.00 N/A N/A 0.117±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000270207 ENST00000604028 N/A N/A N/A 0.030±0.01 0.008±0.00 N/A N/A N/A 0.023±0.00 N/A N/A N/A N/A 0.025±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030104 ENSMUST00000089162 15.090±1.27 28.891±8.04 7.912±0.59 2.960±1.16 16.392±9.30 35.548±12.99 2.133±0.24 8.082±1.28 22.550±13.40 12.544±3.76 0.827±0.21 15.654±7.03 14.800±6.06 3.274±1.35
ENSMUSG00000056755 ENSMUST00000071076 0.364±0.04 0.241±0.07 0.106±0.00 4.895±0.00 0.034±0.01 0.174±0.07 0.084±0.03 0.243±0.20 0.016±0.01 0.012±0.00 N/A 0.709±0.37 0.015±0.00 0.172±0.11
ENSMUST00000172951 0.022±0.00 0.234±0.08 0.069±0.02 4.984±1.35 N/A 0.125±0.01 0.028±0.02 0.254±0.00 0.011±0.00 0.019±0.00 N/A 0.355±0.13 0.011±0.00 0.083±0.04
ENSMUST00000173001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.416±0.00 N/A 0.021±0.00
ENSMUST00000174310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000092448 ENSMUST00000173609 N/A N/A N/A N/A 0.040±0.00 N/A N/A N/A 0.003±0.00 0.030±0.00 0.017±0.00 N/A 0.008±0.00 0.051±0.02
ENSMUSG00000092603 ENSMUST00000174010 N/A N/A N/A 8.461±4.31 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2043.912±1301.14

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