C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005VE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000042723-ENSDARG00000075818 CGP 7955 8:44099926-44634834
GeneTranscriptPositionBiotype
ENSDARG00000042723 (gfra2a)
glial cell line derived neurotrophic factor family receptor alpha 2a 		ENSDART00000062697 (gfra2a-001) 44099926-44278974 protein_coding
ENSDARG00000075818 (dok2)
docking protein 2 		ENSDART00000135238 (dok2-001) 44589284-44634834 protein_coding
ENSDART00000140126 (dok2-002) 44590193-44634811 protein_coding
ENSDART00000147395 (dok2-003) 44589569-44609657 processed_transcript
CIL_0005VE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000044015-ENSDARG00000087271 CGP 7955 10:19744092-20098417
GeneTranscriptPositionBiotype
ENSDARG00000044015 (gfra2b)
glial cell line derived neurotrophic factor family receptor alpha 2b 		ENSDART00000080430 (gfra2b-201) 19744092-19835584 protein_coding
ENSDART00000148013 (gfra2b-001) 19832409-19835754 protein_coding
ENSDARG00000087271 (DOK2 (2 of 2))
docking protein 2, 56kDa 		ENSDART00000122463 (DOK2 (2 of 2)-201) 20067833-20098417 protein_coding
CIL_0005VE_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000168546-ENSG00000147443 CGP 9606 8:21690403-21913860
GeneTranscriptPositionBiotype
ENSG00000147443 (DOK2)
docking protein 2, 56kDa 		ENST00000276420 (DOK2-001) 21908873-21913860 protein_coding
ENST00000517422 (DOK2-002) 21909615-21913690 nonsense_mediated_decay
ENST00000518197 (DOK2-007) 21909635-21913663 protein_coding
ENST00000522011 (DOK2-003) 21909834-21911075 retained_intron
ENST00000523932 (DOK2-004) 21909829-21913676 protein_coding
ENST00000524001 (DOK2-005) 21909464-21912567 retained_intron
ENSG00000168546 (GFRA2)
GDNF family receptor alpha 2 		ENST00000306793 (GFRA2-002) 21692018-21788819 nonsense_mediated_decay
ENST00000517328 (GFRA2-005) 21692843-21812357 protein_coding
ENST00000517892 (GFRA2-004) 21693281-21788474 protein_coding
ENST00000518077 (GFRA2-003) 21692935-21788323 protein_coding
ENST00000519195 (GFRA2-007) 21774976-21788784 protein_coding
ENST00000520676 (GFRA2-008) 21779550-21788159 processed_transcript
ENST00000522071 (GFRA2-006) 21750588-21789253 protein_coding
ENST00000524240 (GFRA2-001) 21690403-21788810 protein_coding
ENSG00000273484 (OR6R2P)
olfactory receptor, family 6, subfamily R, member 2 pseudogene 		ENST00000609216 (OR6R2P-001) 21797460-21797759 unprocessed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005VE_0001ENSDARG00000042723ENSDART00000062697ENSDARG00000075818ENSDART00000135238ENSDART00000140126ENSDART00000147395CIL_0005VE_0002ENSDARG00000044015ENSDART00000080430ENSDART00000148013ENSDARG00000087271ENSDART00000122463CIL_0005VE_0003ENSG00000147443ENST00000276420ENST00000517422ENST00000518197ENST00000522011ENST00000523932ENST00000524001ENSG00000168546ENST00000306793ENST00000517328ENST00000517892ENST00000518077ENST00000519195ENST00000520676ENST00000522071ENST00000524240ENSG00000273484ENST00000609216
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005VE_0001ENSDARG00000042723ENSDART00000062697ENSDARG00000075818ENSDART00000135238ENSDART00000147395CIL_0005VE_0002ENSDARG00000044015ENSDART00000080430ENSDARG00000087271ENSDART00000122463CIL_0005VE_0003ENSG00000147443ENST00000276420ENST00000517422ENST00000518197ENST00000522011ENST00000523932ENST00000524001ENSG00000168546ENST00000306793ENST00000517328ENST00000517892ENST00000518077ENST00000522071ENST00000524240ENSG00000273484ENST00000609216
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000042723 ENSDART00000062697 N/A N/A N/A N/A N/A N/A 0.033±0.01 0.273±0.00 0.021±0.00 N/A 0.241±0.00 N/A N/A N/A
ENSDARG00000075818 ENSDART00000135238 N/A N/A N/A 0.237±0.19 N/A N/A 0.603±0.15 3.482±0.00 0.103±0.00 N/A 0.793±0.00 N/A N/A N/A
ENSDART00000140126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147395 N/A N/A N/A 0.095±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000044015 ENSDART00000080430 N/A N/A N/A 3.867±0.00 N/A N/A 0.157±0.00 0.197±0.00 N/A N/A 0.997±0.00 N/A N/A N/A
ENSDART00000148013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000087271 ENSDART00000122463 N/A N/A N/A 0.401±0.08 N/A N/A 0.249±0.10 N/A 0.027±0.00 N/A 0.204±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000147443 ENST00000276420 N/A N/A 0.192±0.00 0.064±0.04 0.260±0.00 N/A 0.055±0.00 N/A 0.216±0.00 0.419±0.00 0.114±0.00 0.827±0.80 3.045±0.00 N/A
ENST00000517422 2.968±0.00 6.327±0.00 N/A N/A 3.464±0.00 0.624±0.00 1.232±0.00 N/A 0.945±0.00 4.677±2.58 N/A 1.302±0.02 7.659±0.70 1.296±0.00
ENST00000518197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.195±0.00 0.476±0.00 N/A N/A
ENST00000522011 N/A N/A N/A N/A 1.427±0.00 N/A N/A N/A N/A N/A N/A 1.552±0.00 N/A N/A
ENST00000523932 N/A 7.621±0.00 N/A 0.303±0.00 N/A 0.203±0.00 0.322±0.00 0.917±0.00 0.915±0.00 N/A 0.132±0.00 N/A 4.144±0.00 N/A
ENST00000524001 N/A N/A N/A N/A N/A N/A N/A N/A 0.202±0.00 1.353±0.00 N/A 0.827±0.00 9.369±0.00 N/A
ENSG00000168546 ENST00000306793 0.696±0.00 3.608±0.00 0.029±0.00 6.024±2.67 1.266±1.14 0.847±0.00 0.321±0.00 0.221±0.02 0.314±0.09 0.528±0.00 0.066±0.03 0.552±0.30 4.460±1.01 1.981±0.53
ENST00000517328 N/A N/A N/A N/A 0.106±0.00 N/A 0.303±0.00 N/A N/A N/A N/A N/A 2.344±0.00 0.543±0.00
ENST00000517892 N/A N/A 0.183±0.00 N/A 0.183±0.00 N/A N/A 0.119±0.00 0.679±0.00 N/A 0.169±0.00 0.271±0.20 N/A 1.171±0.00
ENST00000518077 N/A N/A N/A N/A N/A 0.494±0.00 N/A 0.130±0.00 0.168±0.00 0.360±0.21 N/A N/A N/A 1.472±0.00
ENST00000519195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522071 N/A N/A N/A N/A N/A N/A N/A N/A 0.496±0.00 0.289±0.00 N/A N/A N/A N/A
ENST00000524240 0.119±0.00 N/A N/A N/A N/A 0.071±0.00 N/A N/A N/A N/A N/A 0.066±0.05 N/A N/A
ENSG00000273484 ENST00000609216 N/A 0.327±0.00 N/A N/A 0.205±0.00 N/A 0.057±0.00 N/A 0.054±0.00 N/A N/A N/A 0.279±0.00 0.364±0.00

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