C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005W7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000128272-ENSG00000187051 CGP 9606 22:39519695-39532855
GeneTranscriptPositionBiotype
ENSG00000128272 (ATF4)
activating transcription factor 4 		ENST00000337304 (ATF4-002) 39520564-39522683 protein_coding
ENST00000396680 (ATF4-201) 39520564-39522685 protein_coding
ENST00000404241 (ATF4-001) 39519695-39522683 protein_coding
ENSG00000187051 (RPS19BP1)
ribosomal protein S19 binding protein 1 		ENST00000334678 (RPS19BP1-001) 39529093-39532855 protein_coding
ENST00000420879 (RPS19BP1-006) 39529156-39532761 nonsense_mediated_decay
ENST00000459956 (RPS19BP1-004) 39529214-39532738 retained_intron
ENST00000472291 (RPS19BP1-003) 39531729-39532760 retained_intron
ENST00000488602 (RPS19BP1-002) 39529097-39532093 retained_intron
ENST00000491966 (RPS19BP1-005) 39529446-39532732 retained_intron

Homo sapiens Ensembl (GRCh38)

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CIL_0005W7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042406-ENSMUSG00000051518 CGP 10090 15:80255184-80264306
GeneTranscriptPositionBiotype
ENSMUSG00000042406 (Atf4)
activating transcription factor 4 		ENSMUST00000109605 (Atf4-201) 80255184-80257540 protein_coding
ENSMUSG00000051518 (Rps19bp1)
ribosomal protein S19 binding protein 1 		ENSMUST00000052499 (Rps19bp1-201) 80260614-80264306 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005W7_0001ENSG00000128272ENST00000337304ENST00000396680ENST00000404241ENSG00000187051ENST00000334678ENST00000420879ENST00000459956ENST00000472291ENST00000488602ENST00000491966CIL_0005W7_0002ENSMUSG00000042406ENSMUST00000109605ENSMUSG00000051518ENSMUST00000052499
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005W7_0001ENSG00000128272ENST00000337304ENST00000396680ENSG00000187051ENST00000334678ENST00000459956ENST00000488602ENST00000491966CIL_0005W7_0002ENSMUSG00000042406ENSMUST00000109605ENSMUSG00000051518ENSMUST00000052499
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000128272 ENST00000337304 N/A 20.685±0.00 0.886±0.00 N/A 5.602±3.05 2.414±0.00 N/A N/A N/A N/A N/A 11.556±0.00 N/A 7.423±0.00
ENST00000396680 86.491±0.00 102.664±0.00 9.744±0.00 52.323±13.91 58.944±31.42 154.410±133.26 34.351±28.20 57.562±20.07 50.131±11.99 87.337±66.08 117.287±41.67 87.791±51.53 125.996±42.01 68.293±30.38
ENST00000404241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000187051 ENST00000334678 33.180±0.00 57.402±0.00 1.561±0.00 27.853±9.15 18.861±13.75 42.215±38.19 19.280±16.81 52.062±41.81 30.507±26.76 37.940±34.37 21.431±13.03 64.449±53.46 77.000±7.17 77.747±11.15
ENST00000420879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000459956 N/A 15.379±0.00 N/A 6.961±0.00 17.207±0.00 1.817±0.00 N/A N/A N/A N/A N/A 5.640±0.00 N/A N/A
ENST00000472291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488602 N/A N/A 0.235±0.00 N/A N/A 0.224±0.00 N/A N/A 0.455±0.00 0.432±0.00 N/A N/A N/A N/A
ENST00000491966 N/A N/A 0.667±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042406 ENSMUST00000109605 79.694±1.15 105.314±29.77 133.505±45.57 94.348±34.20 93.196±6.19 84.040±8.50 34.973±2.89 55.921±9.50 130.122±79.87 83.060±4.42 86.328±14.00 104.648±27.16 118.440±16.56 21.705±4.04
ENSMUSG00000051518 ENSMUST00000052499 13.425±2.34 17.589±2.74 12.723±1.71 20.963±4.52 12.570±3.91 12.344±2.40 5.673±1.14 13.788±1.85 14.712±5.92 8.056±1.33 5.346±0.68 18.845±14.64 39.113±30.48 8.292±1.32

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