C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005WM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000138107-ENSG00000107882 CGP 9606 10:102479229-102633535
GeneTranscriptPositionBiotype
ENSG00000138107 (ACTR1A)
ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) 		ENST00000369905 (ACTR1A-001) 102479229-102502711 protein_coding
ENST00000470322 (ACTR1A-003) 102479230-102483680 processed_transcript
ENST00000480947 (ACTR1A-005) 102484074-102488233 processed_transcript
ENST00000481044 (ACTR1A-006) 102483014-102502654 processed_transcript
ENST00000487599 (ACTR1A-002) 102479237-102502678 protein_coding
ENST00000494549 (ACTR1A-004) 102480795-102484374 processed_transcript
ENSG00000228657 (RP11-170J3.2)
 ENST00000440453 (RP11-170J3.2-001) 102572757-102573225 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0005WM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025228-ENSMUSG00000025231 CGP 10090 19:46376814-46488804
GeneTranscriptPositionBiotype
ENSMUSG00000025228 (Actr1a)
ARP1 actin-related protein 1A, centractin alpha 		ENSMUST00000040270 (Actr1a-201) 46376814-46395735 protein_coding
ENSMUSG00000025231 (Sufu)
suppressor of fused homolog (Drosophila) 		ENSMUST00000039922 (Sufu-001) 46396896-46488804 protein_coding
ENSMUST00000111867 (Sufu-002) 46396918-46486048 protein_coding
ENSMUST00000118440 (Sufu-004) 46397026-46476936 protein_coding
ENSMUST00000120778 (Sufu-003) 46397004-46455707 protein_coding
ENSMUST00000123252 (Sufu-006) 46457906-46475634 processed_transcript
ENSMUST00000144341 (Sufu-005) 46483097-46485982 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005WM_0001ENSG00000138107ENST00000369905ENST00000470322ENST00000480947ENST00000481044ENST00000487599ENST00000494549ENSG00000228657ENST00000440453CIL_0005WM_0002ENSMUSG00000025228ENSMUST00000040270ENSMUSG00000025231ENSMUST00000039922ENSMUST00000111867ENSMUST00000118440ENSMUST00000120778ENSMUST00000123252ENSMUST00000144341
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005WM_0001ENSG00000138107ENST00000369905ENSG00000228657ENST00000440453CIL_0005WM_0002ENSMUSG00000025228ENSMUST00000040270ENSMUSG00000025231ENSMUST00000039922ENSMUST00000111867ENSMUST00000118440
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138107 ENST00000369905 43.077±0.00 33.136±0.00 4.302±0.00 40.999±14.58 23.585±14.37 23.053±12.07 20.303±13.19 21.738±17.32 13.958±2.91 31.944±22.14 58.459±45.41 26.373±9.92 49.621±6.05 45.051±2.12
ENST00000470322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000228657 ENST00000440453 N/A N/A N/A 0.109±0.00 N/A 0.240±0.00 N/A 0.108±0.00 N/A N/A 0.153±0.00 0.073±0.02 N/A 0.250±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025228 ENSMUST00000040270 54.047±10.75 42.810±2.45 37.528±1.09 84.381±17.10 44.810±6.21 50.341±4.80 30.401±3.25 35.098±0.88 23.236±3.15 50.850±1.03 26.913±0.97 47.546±2.08 55.907±10.74 84.708±21.02
ENSMUSG00000025231 ENSMUST00000039922 5.171±2.57 4.286±1.08 7.128±0.25 5.795±2.01 5.498±2.92 2.556±1.33 1.628±0.63 7.664±2.85 1.540±1.01 6.179±1.35 1.541±0.49 7.307±3.84 3.702±0.74 6.508±2.09
ENSMUST00000111867 N/A N/A N/A N/A N/A 1.796±0.00 N/A N/A 0.442±0.00 N/A N/A 4.648±0.30 N/A 76.721±23.37
ENSMUST00000118440 N/A N/A N/A N/A N/A N/A 0.738±0.00 N/A 0.331±0.03 N/A N/A N/A N/A N/A
ENSMUST00000120778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123252 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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