C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005X9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000045877-ENSDARG00000079391 CGP 7955 4:1670194-1685437
GeneTranscriptPositionBiotype
ENSDARG00000045877 (ube2nb)
ubiquitin-conjugating enzyme E2Nb 		ENSDART00000067433 (ube2nb-001) 1670194-1678947 protein_coding
ENSDARG00000079391 (MRPL42)
mitochondrial ribosomal protein L42 		ENSDART00000111858 (MRPL42-201) 1682421-1685437 protein_coding
CIL_0005X9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000177889-ENSG00000198015 CGP 9606 12:93405673-93516213
GeneTranscriptPositionBiotype
ENSG00000177889 (UBE2N)
ubiquitin-conjugating enzyme E2N 		ENST00000318066 (UBE2N-001) 93405690-93442262 protein_coding
ENST00000548946 (UBE2N-006) 93405673-93407323 processed_transcript
ENST00000549490 (UBE2N-005) 93409763-93441898 nonsense_mediated_decay
ENST00000549833 (UBE2N-002) 93409742-93441256 protein_coding
ENST00000550657 (UBE2N-004) 93408371-93441943 protein_coding
ENST00000552442 (UBE2N-003) 93409801-93441935 protein_coding
ENSG00000198015 (MRPL42)
mitochondrial ribosomal protein L42 		ENST00000358678 (MRPL42-002) 93467518-93502661 nonsense_mediated_decay
ENST00000393128 (MRPL42-003) 93467517-93502652 protein_coding
ENST00000547098 (MRPL42-006) 93467518-93488472 protein_coding
ENST00000548545 (MRPL42-005) 93469214-93487897 protein_coding
ENST00000549561 (MRPL42-007) 93469189-93502864 nonsense_mediated_decay
ENST00000549982 (MRPL42-001) 93467488-93516213 protein_coding
ENST00000551396 (MRPL42-008) 93467540-93501385 nonsense_mediated_decay
ENST00000552217 (MRPL42-004) 93467516-93501576 protein_coding
ENST00000552326 (MRPL42-010) 93467517-93501291 processed_transcript
ENST00000552938 (MRPL42-009) 93500747-93502621 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005X9_0001ENSDARG00000045877ENSDART00000067433ENSDARG00000079391ENSDART00000111858CIL_0005X9_0002ENSG00000177889ENST00000318066ENST00000548946ENST00000549490ENST00000549833ENST00000550657ENST00000552442ENSG00000198015ENST00000358678ENST00000393128ENST00000547098ENST00000548545ENST00000549561ENST00000549982ENST00000551396ENST00000552217ENST00000552326ENST00000552938
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005X9_0001ENSDARG00000045877ENSDART00000067433ENSDARG00000079391ENSDART00000111858CIL_0005X9_0002ENSG00000177889ENST00000318066ENST00000549490ENST00000549833ENST00000550657ENSG00000198015ENST00000358678ENST00000393128ENST00000548545ENST00000549561ENST00000549982ENST00000552217ENST00000552326ENST00000552938
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000045877 ENSDART00000067433 N/A N/A N/A 22.308±14.23 N/A N/A 19.234±3.97 12.277±12.24 2.040±0.00 N/A 8.545±0.00 N/A N/A N/A
ENSDARG00000079391 ENSDART00000111858 N/A N/A N/A 11.171±10.41 N/A N/A 49.829±6.46 42.042±0.00 2.199±0.00 N/A 14.116±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000177889 ENST00000318066 N/A 9.197±0.00 N/A 8.424±0.17 N/A 3.781±0.00 N/A 10.782±0.00 N/A 3.228±0.48 N/A 5.630±0.00 N/A 8.135±0.00
ENST00000548946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549490 N/A N/A N/A N/A N/A N/A N/A N/A 16.080±0.00 N/A N/A N/A N/A 80.247±13.06
ENST00000549833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 61.841±0.00
ENST00000550657 8.149±0.00 N/A N/A N/A 8.627±0.00 8.598±0.00 N/A N/A 3.094±0.00 N/A N/A 11.773±0.57 12.632±2.92 17.727±0.00
ENST00000552442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198015 ENST00000358678 N/A N/A N/A N/A N/A 5.391±0.00 N/A 1.815±0.00 N/A N/A 0.861±0.00 N/A N/A N/A
ENST00000393128 3.753±0.00 3.529±0.00 4.120±0.00 N/A 3.508±1.01 3.967±0.00 5.513±0.00 5.675±4.09 4.270±1.43 3.823±0.94 2.081±0.00 5.135±1.62 3.817±0.96 4.526±1.35
ENST00000547098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.132±0.00 N/A 20.098±0.00
ENST00000549561 N/A N/A N/A N/A N/A 9.831±0.00 6.282±0.00 N/A N/A N/A 1.305±0.00 7.397±0.00 3.226±0.38 N/A
ENST00000549982 1.203±0.00 0.522±0.00 0.771±0.00 2.327±0.61 0.757±0.11 0.699±0.00 0.830±0.16 0.530±0.00 0.637±0.11 N/A 0.116±0.00 1.233±0.44 0.270±0.08 0.873±0.25
ENST00000551396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552217 N/A N/A N/A N/A N/A 3.269±0.00 N/A 1.928±0.00 N/A 2.668±0.00 N/A 12.823±4.43 4.347±1.76 9.711±0.48
ENST00000552326 N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.939±0.00 3.777±0.00 N/A N/A 7.525±0.00
ENST00000552938 N/A N/A N/A N/A N/A N/A N/A N/A 3.296±0.00 5.427±0.00 N/A 7.474±0.00 N/A N/A

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