C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005YN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000139218-ENSG00000111371 CGP 9606 12:45919131-46270017
GeneTranscriptPositionBiotype
ENSG00000111371 (SLC38A1)
solute carrier family 38, member 1
ENST00000398637 (SLC38A1-002) 46183063-46269012 protein_coding
ENST00000439706 (SLC38A1-003) 46187801-46268997 protein_coding
ENST00000546519 (SLC38A1-008) 46268860-46270017 processed_transcript
ENST00000546893 (SLC38A1-006) 46188565-46269119 protein_coding
ENST00000548979 (SLC38A1-010) 46197378-46198021 retained_intron
ENST00000549049 (SLC38A1-005) 46187801-46268995 protein_coding
ENST00000549633 (SLC38A1-004) 46198728-46269043 processed_transcript
ENST00000550173 (SLC38A1-009) 46229232-46269951 protein_coding
ENST00000551506 (SLC38A1-011) 46207583-46268806 processed_transcript
ENST00000552197 (SLC38A1-001) 46195725-46267701 protein_coding
ENST00000612161 (SLC38A1-201) 46196127-46239895 protein_coding
ENSG00000239397 (RP11-101K23.1)
ENST00000480555 (RP11-101K23.1-001) 46004038-46004685 processed_pseudogene
ENSG00000274591 (RP11-474P2.5)
ENST00000611566 (RP11-474P2.5-001) 46239106-46239473 sense_intronic
CIL_0005YN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033228-ENSMUSG00000023169 CGP 10090 15:96411698-96642913
GeneTranscriptPositionBiotype
ENSMUSG00000023169 (Slc38a1)
solute carrier family 38, member 1
ENSMUST00000088452 (Slc38a1-201) 96571418-96642913 protein_coding
ENSMUST00000088454 (Slc38a1-202) 96571418-96642343 protein_coding
ENSMUST00000100262 (Slc38a1-203) 96571418-96641962 protein_coding
ENSMUSG00000033228 (Scaf11)
SR-related CTD-associated factor 11
ENSMUST00000047835 (Scaf11-201) 96411698-96460843 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005YN_0001ENSG00000111371ENST00000398637ENST00000439706ENST00000546519ENST00000546893ENST00000548979ENST00000549049ENST00000549633ENST00000550173ENST00000551506ENST00000552197ENST00000612161ENSG00000239397ENST00000480555ENSG00000274591ENST00000611566CIL_0005YN_0002ENSMUSG00000023169ENSMUST00000088452ENSMUST00000088454ENSMUST00000100262ENSMUSG00000033228ENSMUST00000047835
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005YN_0001ENSG00000111371ENST00000398637ENST00000439706ENST00000546893ENST00000549049ENST00000552197ENSG00000239397ENST00000480555ENSG00000274591ENST00000611566CIL_0005YN_0002ENSMUSG00000023169ENSMUST00000088452ENSMUST00000088454ENSMUST00000100262ENSMUSG00000033228ENSMUST00000047835
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000111371 ENST00000398637 0.898±0.00 4.044±0.00 0.738±0.00 3.799±1.40 1.311±0.69 3.339±0.03 8.549±3.97 1.761±0.00 1.415±0.16 1.663±0.00 8.108±0.00 3.746±2.38 8.213±2.00 1.424±0.00
ENST00000439706 N/A N/A 2.970±0.00 N/A N/A 9.557±0.00 N/A N/A 5.315±0.00 4.130±0.00 N/A 9.525±0.00 N/A N/A
ENST00000546519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546893 N/A N/A N/A 10.875±0.00 7.246±0.00 N/A 7.013±0.00 1.283±0.00 N/A 6.134±0.00 1.475±0.00 N/A N/A N/A
ENST00000548979 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549049 N/A N/A N/A N/A 5.868±0.00 N/A N/A N/A N/A N/A 2.088±0.00 N/A N/A N/A
ENST00000549633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.133±0.00
ENST00000612161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000239397 ENST00000480555 N/A N/A N/A N/A 0.102±0.00 N/A N/A 0.199±0.00 N/A N/A N/A N/A N/A 0.045±0.00
ENSG00000274591 ENST00000611566 0.085±0.00 0.298±0.00 0.825±0.00 0.286±0.00 0.288±0.00 0.135±0.09 0.204±0.08 0.178±0.00 0.140±0.00 0.751±0.43 N/A 0.298±0.18 0.629±0.00 0.178±0.12
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023169 ENSMUST00000088452 3.382±3.18 1.387±0.62 2.978±0.03 13.603±3.00 5.066±2.10 5.197±0.43 1.146±0.08 0.428±0.13 1.842±1.81 3.251±0.55 0.440±0.24 11.919±3.65 3.690±0.12 0.310±0.11
ENSMUST00000088454 3.060±1.99 1.529±0.00 2.637±0.37 7.664±1.43 2.643±2.21 4.493±1.32 1.270±0.52 0.672±0.16 0.970±0.87 1.470±0.29 0.090±0.01 4.865±2.97 26.322±9.62 0.227±0.15
ENSMUST00000100262 2.847±0.04 1.041±0.30 0.943±0.12 3.902±0.99 1.583±0.52 2.110±0.18 0.388±0.06 0.221±0.02 0.537±0.32 0.874±0.14 N/A 3.210±0.67 5.386±0.47 0.104±0.03
ENSMUSG00000033228 ENSMUST00000047835 3.471±3.08 18.821±3.38 7.421±2.06 4.892±2.06 8.667±5.44 8.361±2.49 1.584±0.70 7.126±2.02 6.837±3.45 7.577±1.66 2.719±0.86 17.104±6.41 12.242±4.88 0.584±0.28

Loading