C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin protein ligase E3C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000348165 UBE3C-001 ENSG00000009335 9606 + 7:157138913-157269372 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000348165
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000348165 12.691±0.00 5.807±0.00 1.770±0.00 9.142±0.11 12.291±2.69 11.697±0.96 9.812±4.20 7.811±3.73 8.019±3.31 6.574±0.95 14.300±1.69 12.150±5.32 5.441±5.17 21.851±3.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PG CIL_0007PG_0001 UCNEbase 7:156746986-157209208
CIL_0005Z2 CIL_0005Z2_0001 CGP 7:156994051-157269372

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000209 IDA protein polyubiquitination
GO:0000502 IEA proteasome complex
GO:0004842 IDA:IEA ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005622 IC intracellular
GO:0005634 IBA nucleus
GO:0005737 IBA cytoplasm
GO:0016874 IEA ligase activity
GO:0042787 IBA protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049453 Ube3c-201 protein_coding Mus_musculus 0 3829

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