C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000625_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000053215-ENSDARG00000017213 CGP 7955 16:35157785-35318475
GeneTranscriptPositionBiotype
ENSDARG00000017213 (prss35)
protease, serine, 35 		ENSDART00000003552 (prss35-001) 35310202-35318475 protein_coding
ENSDARG00000053215 (me1)
malic enzyme 1, NADP(+)-dependent, cytosolic 		ENSDART00000075218 (me1-201) 35157791-35314731 protein_coding
ENSDART00000101969 (me1-002) 35157785-35290379 protein_coding
ENSDART00000147941 (me1-001) 35157785-35314738 protein_coding
ENSDART00000149096 (me1-003) 35202507-35290386 retained_intron

Danio rerio Ensembl (Zv9)

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CIL_000625_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000065833-ENSG00000146250 CGP 9606 6:83210389-83525704
GeneTranscriptPositionBiotype
ENSG00000065833 (ME1)
malic enzyme 1, NADP(+)-dependent, cytosolic 		ENST00000369705 (ME1-001) 83210389-83431071 protein_coding
ENSG00000146250 (PRSS35)
protease, serine, 35 		ENST00000369700 (PRSS35-001) 83512538-83525704 protein_coding
ENSG00000219951 (RP11-378G13.2)
 ENST00000403475 (RP11-378G13.2-001) 83392416-83393409 processed_pseudogene
ENSG00000252309 (AL391416.1)
 ENST00000516500 (AL391416.1-201) 83367706-83367791 miRNA

Homo sapiens Ensembl (GRCh38)

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CIL_000625_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032418-ENSMUSG00000033491 CGP 10090 9:86581371-86758443
GeneTranscriptPositionBiotype
ENSMUSG00000032418 (Me1)
malic enzyme 1, NADP(+)-dependent, cytosolic 		ENSMUST00000034989 (Me1-001) 86581371-86695953 protein_coding
ENSMUST00000185374 (Me1-002) 86581406-86687277 protein_coding
ENSMUST00000189847 (Me1-004) 86613541-86618737 processed_transcript
ENSMUST00000189968 (Me1-003) 86582686-86618704 processed_transcript
ENSMUSG00000033491 (Prss35)
protease, serine 35 		ENSMUST00000036426 (Prss35-001) 86743649-86758443 protein_coding
ENSMUST00000179574 (Prss35-201) 86743649-86758272 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000625_0001ENSDARG00000017213ENSDART00000003552ENSDARG00000053215ENSDART00000075218ENSDART00000101969ENSDART00000147941ENSDART00000149096CIL_000625_0002ENSG00000065833ENST00000369705ENSG00000146250ENST00000369700ENSG00000219951ENST00000403475ENSG00000252309ENST00000516500CIL_000625_0003ENSMUSG00000032418ENSMUST00000034989ENSMUST00000185374ENSMUST00000189847ENSMUST00000189968ENSMUSG00000033491ENSMUST00000036426ENSMUST00000179574
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000625_0001ENSDARG00000017213ENSDART00000003552ENSDARG00000053215ENSDART00000075218ENSDART00000101969ENSDART00000147941ENSDART00000149096CIL_000625_0002ENSG00000065833ENST00000369705ENSG00000146250ENST00000369700ENSG00000219951ENST00000403475ENSG00000252309ENST00000516500CIL_000625_0003ENSMUSG00000032418ENSMUST00000034989ENSMUST00000185374ENSMUST00000189968ENSMUSG00000033491ENSMUST00000036426ENSMUST00000179574
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000017213 ENSDART00000003552 N/A N/A N/A 13.410±3.57 N/A N/A 3.223±1.98 4.485±0.50 0.138±0.00 N/A 1.073±0.00 N/A N/A N/A
ENSDARG00000053215 ENSDART00000075218 N/A N/A N/A 0.081±0.05 N/A N/A 1.036±0.12 2.495±0.00 0.347±0.00 N/A N/A N/A N/A N/A
ENSDART00000101969 N/A N/A N/A 0.130±0.14 N/A N/A 5.484±2.91 4.506±0.00 0.380±0.00 N/A 2.068±0.00 N/A N/A N/A
ENSDART00000147941 N/A N/A N/A 0.033±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149096 N/A N/A N/A N/A N/A N/A 7.711±2.88 12.887±0.00 0.916±0.00 N/A 3.258±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000065833 ENST00000369705 7.570±0.00 3.555±0.00 0.426±0.00 5.998±1.02 18.765±14.46 3.704±0.17 3.851±2.41 2.248±0.88 4.376±1.02 2.854±0.43 6.796±0.00 5.948±3.07 1.187±0.36 7.565±0.23
ENSG00000146250 ENST00000369700 0.145±0.00 1.153±0.00 0.994±0.00 0.780±0.03 0.103±0.06 0.099±0.00 0.053±0.00 0.392±0.32 0.249±0.20 0.365±0.04 0.099±0.00 2.355±1.98 1.776±1.22 1.924±0.71
ENSG00000219951 ENST00000403475 N/A N/A N/A 0.090±0.00 N/A N/A 0.063±0.03 N/A 0.195±0.18 0.034±0.00 0.669±0.00 0.056±0.00 0.045±0.00 0.151±0.00
ENSG00000252309 ENST00000516500 N/A N/A N/A N/A 0.298±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032418 ENSMUST00000034989 224.349±46.09 247.709±70.17 48.890±3.86 9.610±3.99 156.581±73.04 5.750±1.13 33.918±1.64 79.519±4.43 18.874±18.87 23.656±4.42 77.364±7.69 116.599±58.17 17.791±5.40 66.651±15.91
ENSMUST00000185374 90.408±5.15 110.458±10.29 N/A N/A 157.584±69.71 N/A N/A N/A 5.882±0.61 13.110±5.04 N/A 44.105±11.55 N/A N/A
ENSMUST00000189847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189968 100.185±0.00 N/A N/A 22.062±0.00 102.331±0.00 N/A 13.571±0.00 35.615±0.00 19.409±15.60 15.191±0.07 N/A 149.701±119.46 28.114±15.24 62.713±40.98
ENSMUSG00000033491 ENSMUST00000036426 0.091±0.05 14.412±6.74 5.128±0.97 1.064±0.24 0.173±0.00 N/A 0.126±0.06 0.332±0.21 0.632±0.56 0.606±0.17 0.023±0.01 29.157±30.18 1.393±0.64 1.410±0.47
ENSMUST00000179574 0.082±0.00 6.910±3.90 3.240±0.20 0.224±0.00 0.305±0.07 0.034±0.01 0.069±0.00 0.359±0.00 0.112±0.09 N/A 0.012±0.00 31.100±16.56 1.495±0.79 0.736±0.12

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