C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: doublesex and mab-3 related transcription factor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000190165 DMRT3-001 ENSG00000064218 9606 + 9:976964-991731 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLungMuscleOvaryTestisENST00000190165
Transcript ID Adipose Adrenal Brain Breast Colon Heart Lung Muscle Ovary Testis
ENST00000190165 0.775±0.00 0.800±0.00 0.295±0.20 0.669±0.49 0.117±0.00 0.022±0.00 0.289±0.00 0.188±0.00 0.044±0.01 4.728±2.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UR CIL_0008UR_0001 VISTA 9:668797-1270093
CIL_0008NH CIL_0008NH_0001 VISTA 9:673435-1275288
CIL_0006Y7 CIL_0006Y7_0002 CGP 9:841690-991731
CIL_0007KZ CIL_0007KZ_0001 UCNEbase 9:927217-1320417
CIL_000644 CIL_000644_0002 CGP 9:976964-1057552

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007548 NAS sex differentiation
GO:0007628 IEA adult walking behavior
GO:0019226 IEA transmission of nerve impulse
GO:0021521 IEA ventral spinal cord interneuron specification
GO:0042487 IEA regulation of odontogenesis of dentin-containing tooth
GO:0043565 IEA sequence-specific DNA binding
GO:0046661 IEA male sex differentiation
GO:0046872 IEA metal ion binding
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048935 Dmrt3-201 protein_coding Mus_musculus 0 1635

Loading