C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00065X_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000107882-ENSG00000171206 CGP 9606 10:102503987-102658407
GeneTranscriptPositionBiotype
ENSG00000171206 (TRIM8)
tripartite motif containing 8 		ENST00000302424 (TRIM8-001) 102644496-102658407 protein_coding
ENST00000462202 (TRIM8-003) 102644887-102656954 protein_coding
ENST00000479004 (TRIM8-004) 102655281-102657087 processed_transcript
ENST00000487927 (TRIM8-002) 102649219-102656969 processed_transcript
ENSG00000228657 (RP11-170J3.2)
 ENST00000440453 (RP11-170J3.2-001) 102572757-102573225 processed_pseudogene
ENSG00000272933 (RP11-47A8.5)
 ENST00000607967 (RP11-47A8.5-001) 102642792-102644140 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_00065X_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025231-ENSMUSG00000025034 CGP 10090 19:46396896-46516444
GeneTranscriptPositionBiotype
ENSMUSG00000025034 (Trim8)
tripartite motif-containing 8 		ENSMUST00000026008 (Trim8-201) 46501648-46516444 protein_coding
ENSMUSG00000025231 (Sufu)
suppressor of fused homolog (Drosophila) 		ENSMUST00000039922 (Sufu-001) 46396896-46488804 protein_coding
ENSMUST00000111867 (Sufu-002) 46396918-46486048 protein_coding
ENSMUST00000118440 (Sufu-004) 46397026-46476936 protein_coding
ENSMUST00000120778 (Sufu-003) 46397004-46455707 protein_coding
ENSMUST00000123252 (Sufu-006) 46457906-46475634 processed_transcript
ENSMUST00000144341 (Sufu-005) 46483097-46485982 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00065X_0001ENSG00000171206ENST00000302424ENST00000462202ENST00000479004ENST00000487927ENSG00000228657ENST00000440453ENSG00000272933ENST00000607967CIL_00065X_0002ENSMUSG00000025034ENSMUST00000026008ENSMUSG00000025231ENSMUST00000039922ENSMUST00000111867ENSMUST00000118440ENSMUST00000120778ENSMUST00000123252ENSMUST00000144341
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00065X_0001ENSG00000171206ENST00000302424ENST00000462202ENST00000487927ENSG00000228657ENST00000440453ENSG00000272933ENST00000607967CIL_00065X_0002ENSMUSG00000025034ENSMUST00000026008ENSMUSG00000025231ENSMUST00000039922ENSMUST00000111867ENSMUST00000118440
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000171206 ENST00000302424 48.720±0.00 18.703±0.00 7.042±0.00 16.235±8.27 38.791±30.80 14.057±10.32 11.228±9.60 16.160±10.73 7.642±2.89 30.962±28.17 13.471±7.52 26.374±17.05 26.626±9.80 18.420±0.83
ENST00000462202 N/A 25.058±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487927 42.611±0.00 N/A N/A N/A 81.467±0.00 24.962±0.00 N/A N/A N/A N/A N/A N/A 12.953±0.00 N/A
ENSG00000228657 ENST00000440453 N/A N/A N/A 0.109±0.00 N/A 0.240±0.00 N/A 0.108±0.00 N/A N/A 0.153±0.00 0.073±0.02 N/A 0.250±0.00
ENSG00000272933 ENST00000607967 4.922±0.00 2.047±0.00 N/A 2.479±1.65 2.409±2.07 1.647±1.09 1.619±1.60 3.971±3.74 1.560±0.00 9.361±0.00 2.290±1.18 1.912±1.24 2.120±0.38 2.357±0.40
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025034 ENSMUST00000026008 18.651±2.21 19.939±9.80 10.005±2.89 23.455±12.67 20.276±9.73 21.847±2.80 7.457±1.12 17.129±2.57 7.216±2.39 46.263±5.35 7.719±0.39 33.953±12.91 19.513±8.27 1.121±0.28
ENSMUSG00000025231 ENSMUST00000039922 5.171±2.57 4.286±1.08 7.128±0.25 5.795±2.01 5.498±2.92 2.556±1.33 1.628±0.63 7.664±2.85 1.540±1.01 6.179±1.35 1.541±0.49 7.307±3.84 3.702±0.74 6.508±2.09
ENSMUST00000111867 N/A N/A N/A N/A N/A 1.796±0.00 N/A N/A 0.442±0.00 N/A N/A 4.648±0.30 N/A 76.721±23.37
ENSMUST00000118440 N/A N/A N/A N/A N/A N/A 0.738±0.00 N/A 0.331±0.03 N/A N/A N/A N/A N/A
ENSMUST00000120778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123252 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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