C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00068T_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000131462-ENSG00000037042 CGP 9606 17:42609676-42667006
GeneTranscriptPositionBiotype
ENSG00000037042 (TUBG2)
tubulin, gamma 2 		ENST00000251412 (TUBG2-001) 42659305-42667006 protein_coding
ENST00000588870 (TUBG2-002) 42659307-42666822 retained_intron
ENST00000590396 (TUBG2-003) 42660260-42661391 retained_intron
ENSG00000131462 (TUBG1)
tubulin, gamma 1 		ENST00000251413 (TUBG1-001) 42609676-42615234 protein_coding
ENST00000588056 (TUBG1-003) 42609686-42612266 retained_intron
ENST00000589613 (TUBG1-002) 42609716-42611267 retained_intron
ENST00000589688 (TUBG1-005) 42609689-42615221 nonsense_mediated_decay
ENST00000591509 (TUBG1-004) 42609686-42613911 protein_coding
ENSG00000141699 (FAM134C)
family with sequence similarity 134, member C 		ENST00000309428 (FAM134C-001) 42579515-42609384 protein_coding
ENST00000585726 (FAM134C-008) 42585125-42609384 nonsense_mediated_decay
ENST00000585894 (FAM134C-002) 42581329-42610623 protein_coding
ENST00000586796 (FAM134C-009) 42587695-42609384 retained_intron
ENST00000586870 (FAM134C-004) 42581613-42609386 nonsense_mediated_decay
ENST00000588423 (FAM134C-005) 42586768-42610603 protein_coding
ENST00000589007 (FAM134C-011) 42582735-42586957 retained_intron
ENST00000589797 (FAM134C-003) 42579513-42609377 nonsense_mediated_decay
ENST00000590035 (FAM134C-012) 42585125-42586432 retained_intron
ENST00000590541 (FAM134C-007) 42592132-42609324 nonsense_mediated_decay
ENST00000591547 (FAM134C-006) 42585201-42610593 protein_coding
ENST00000593251 (FAM134C-010) 42585211-42609375 nonsense_mediated_decay
ENSG00000267132 (HMGB3P27)
high mobility group box 3 pseudogene 27 		ENST00000589177 (HMGB3P27-001) 42648178-42648738 processed_pseudogene
ENSG00000267189 (ATP5LP7)
ATP synthase, H+ transporting, mitochondrial Fo complex, subunit g, pseudogene 7 		ENST00000589299 (ATP5LP7-001) 42647834-42648143 processed_pseudogene
CIL_00068T_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035198-ENSMUSG00000045007 CGP 10090 11:101119938-101161787
GeneTranscriptPositionBiotype
ENSMUSG00000035198 (Tubg1)
tubulin, gamma 1 		ENSMUST00000043680 (Tubg1-001) 101119938-101126419 protein_coding
ENSMUST00000137844 (Tubg1-002) 101124500-101125828 processed_transcript
ENSMUSG00000045007 (Tubg2)
tubulin, gamma 2 		ENSMUST00000043654 (Tubg2-001) 101155907-101161787 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00068T_0001ENSG00000037042ENST00000251412ENST00000588870ENST00000590396ENSG00000131462ENST00000251413ENST00000588056ENST00000589613ENST00000589688ENST00000591509ENSG00000141699ENST00000309428ENST00000585726ENST00000585894ENST00000586796ENST00000586870ENST00000588423ENST00000589007ENST00000589797ENST00000590035ENST00000590541ENST00000591547ENST00000593251ENSG00000267132ENST00000589177ENSG00000267189ENST00000589299CIL_00068T_0002ENSMUSG00000035198ENSMUST00000043680ENSMUST00000137844ENSMUSG00000045007ENSMUST00000043654
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00068T_0001ENSG00000037042ENST00000251412ENST00000588870ENST00000590396ENSG00000131462ENST00000251413ENST00000591509ENSG00000141699ENST00000309428ENST00000585894ENST00000586870ENST00000589007ENSG00000267132ENST00000589177ENSG00000267189ENST00000589299CIL_00068T_0002ENSMUSG00000035198ENSMUST00000043680ENSMUST00000137844ENSMUSG00000045007ENSMUST00000043654
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000037042 ENST00000251412 7.583±0.00 6.485±0.00 N/A 32.726±18.50 9.033±7.78 9.166±0.00 2.333±1.70 6.363±6.15 2.078±0.16 4.251±2.97 2.013±0.00 9.077±1.41 6.615±0.74 8.769±2.30
ENST00000588870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.225±0.00 2.169±0.00 N/A 0.882±0.00
ENST00000590396 N/A 1.827±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.127±0.00 N/A 0.999±0.00
ENSG00000131462 ENST00000251413 13.620±0.00 14.974±0.00 3.451±0.00 13.726±4.09 16.801±0.00 5.242±1.78 8.304±5.93 22.373±0.00 6.652±3.28 8.138±5.47 24.481±19.65 22.190±7.06 21.818±4.44 108.998±0.70
ENST00000588056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.582±0.00 16.968±0.00 137.657±0.00
ENSG00000141699 ENST00000309428 12.331±0.00 16.906±0.00 N/A 9.294±0.00 6.358±5.15 1.837±0.00 2.457±0.00 4.621±2.81 3.038±0.58 2.284±0.00 10.600±0.00 10.584±4.33 9.295±1.76 14.131±1.42
ENST00000585726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585894 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.127±0.00 N/A N/A N/A N/A
ENST00000586796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.644±0.00 N/A N/A N/A
ENST00000588423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589007 N/A N/A 9.960±0.00 N/A 10.866±0.00 N/A N/A 14.805±0.00 N/A 9.978±0.00 N/A N/A N/A N/A
ENST00000589797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267132 ENST00000589177 N/A N/A N/A N/A N/A N/A N/A N/A 0.517±0.00 N/A 0.023±0.00 N/A N/A 0.025±0.00
ENSG00000267189 ENST00000589299 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.141±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035198 ENSMUST00000043680 6.300±1.78 8.955±4.14 3.495±1.89 11.325±6.14 3.462±1.69 4.151±0.40 3.734±1.18 4.444±0.90 6.438±3.27 3.001±0.42 13.520±1.00 6.549±7.76 18.238±14.60 8.270±1.20
ENSMUST00000137844 N/A N/A N/A N/A 1.156±0.28 N/A N/A N/A N/A N/A N/A 2.560±0.84 N/A N/A
ENSMUSG00000045007 ENSMUST00000043654 0.760±0.40 1.765±0.12 1.794±0.80 15.161±8.20 0.656±0.43 1.341±0.20 0.506±0.10 0.431±0.14 0.098±0.04 0.786±0.28 0.875±0.18 2.708±0.71 0.607±0.50 0.437±0.15

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