C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00069H_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000123975-ENSG00000187742 CGP 9606 9:89311198-89359662
GeneTranscriptPositionBiotype
ENSG00000123975 (CKS2)
CDC28 protein kinase regulatory subunit 2 		ENST00000314355 (CKS2-001) 89311198-89316703 protein_coding
ENSG00000187742 (SECISBP2)
SECIS binding protein 2 		ENST00000339901 (SECISBP2-004) 89318519-89359642 protein_coding
ENST00000375807 (SECISBP2-001) 89318506-89359650 protein_coding
ENST00000425851 (SECISBP2-002) 89325960-89341479 protein_coding
ENST00000440898 (SECISBP2-003) 89332588-89338510 protein_coding
ENST00000470305 (SECISBP2-005) 89322200-89330445 processed_transcript
ENST00000477484 (SECISBP2-006) 89332917-89339947 processed_transcript
ENST00000496597 (SECISBP2-007) 89356526-89358153 processed_transcript
ENST00000498819 (SECISBP2-008) 89348148-89358129 processed_transcript
ENST00000534113 (SECISBP2-201) 89318851-89359662 protein_coding
ENSG00000265112 (MIR3153)
microRNA 3153 		ENST00000580744 (MIR3153-201) 89312225-89312306 miRNA
CIL_00069H_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000062248-ENSMUSG00000035139 CGP 10090 13:51645232-51684044
GeneTranscriptPositionBiotype
ENSMUSG00000035139 (Secisbp2)
SECIS binding protein 2 		ENSMUST00000040117 (Secisbp2-001) 51651697-51684044 protein_coding
ENSMUST00000110044 (Secisbp2-002) 51651741-51666256 protein_coding
ENSMUST00000127360 (Secisbp2-004) 51651797-51657029 processed_transcript
ENSMUST00000146011 (Secisbp2-006) 51679733-51682529 retained_intron
ENSMUST00000153877 (Secisbp2-005) 51681773-51683489 retained_intron
ENSMUST00000154202 (Secisbp2-003) 51651797-51665345 processed_transcript
ENSMUSG00000062248 (Cks2)
CDC28 protein kinase regulatory subunit 2 		ENSMUST00000075853 (Cks2-001) 51645232-51650660 protein_coding
ENSMUSG00000064672 (Gm22806)
predicted gene, 22806 		ENSMUST00000082738 (Gm22806-201) 51648199-51648334 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00069H_0001ENSG00000123975ENST00000314355ENSG00000187742ENST00000339901ENST00000375807ENST00000425851ENST00000440898ENST00000470305ENST00000477484ENST00000496597ENST00000498819ENST00000534113ENSG00000265112ENST00000580744CIL_00069H_0002ENSMUSG00000035139ENSMUST00000040117ENSMUST00000110044ENSMUST00000127360ENSMUST00000146011ENSMUST00000153877ENSMUST00000154202ENSMUSG00000062248ENSMUST00000075853ENSMUSG00000064672ENSMUST00000082738
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00069H_0001ENSG00000123975ENST00000314355ENSG00000187742ENST00000339901ENST00000375807ENST00000470305ENSG00000265112ENST00000580744CIL_00069H_0002ENSMUSG00000035139ENSMUST00000040117ENSMUST00000110044ENSMUSG00000062248ENSMUST00000075853ENSMUSG00000064672ENSMUST00000082738
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000123975 ENST00000314355 1.215±0.00 3.139±0.00 1.494±0.00 2.003±0.59 3.336±1.63 8.483±1.08 1.738±0.39 7.224±6.31 1.461±0.97 6.433±1.10 1.138±0.00 49.276±30.25 21.955±4.20 99.585±12.76
ENSG00000187742 ENST00000339901 2.200±0.00 5.085±0.00 N/A 1.808±0.00 1.412±0.00 3.420±0.00 1.830±0.00 N/A 5.193±0.00 2.372±0.00 2.864±0.00 5.298±0.95 2.027±0.24 12.274±0.00
ENST00000375807 N/A N/A 2.419±0.00 2.895±0.34 2.204±0.27 2.694±0.52 1.199±0.18 3.726±1.81 2.120±0.90 2.972±0.85 1.487±0.00 6.272±2.52 2.871±0.16 N/A
ENST00000425851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470305 N/A N/A 1.208±0.00 0.704±0.00 0.422±0.00 1.222±0.00 0.428±0.00 0.902±0.00 1.573±0.00 4.027±0.00 0.356±0.00 2.310±1.04 N/A N/A
ENST00000477484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534113 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000265112 ENST00000580744 N/A N/A N/A N/A N/A N/A N/A 0.978±0.00 N/A N/A N/A N/A 2.787±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035139 ENSMUST00000040117 6.029±0.54 8.342±1.86 5.705±1.38 7.996±3.15 5.328±2.07 6.169±2.33 4.119±0.74 8.420±1.20 7.143±2.04 5.551±1.17 3.363±0.79 7.915±3.18 5.303±1.94 8.407±1.03
ENSMUST00000110044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.204±0.00 N/A N/A
ENSMUST00000127360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146011 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000062248 ENSMUST00000075853 6.072±3.37 7.901±1.03 7.134±0.76 23.999±17.29 3.715±0.80 17.707±1.07 0.632±0.20 21.138±1.60 114.427±108.83 3.761±0.61 0.316±0.30 19.792±5.36 51.848±39.17 47.515±18.86
ENSMUSG00000064672 ENSMUST00000082738 N/A N/A N/A N/A N/A N/A N/A N/A 10.945±5.78 N/A N/A 15.157±9.18 12.053±5.23 N/A

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