C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006DW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000077588-ENSDARG00000052769 CGP 7955 14:36788676-36952579
GeneTranscriptPositionBiotype
ENSDARG00000052769 (glrbb)
glycine receptor, beta b 		ENSDART00000074685 (glrbb-201) 36912246-36952579 protein_coding
ENSDART00000132907 (glrbb-001) 36912248-36952579 protein_coding
ENSDARG00000077588 (PDGFC)
platelet derived growth factor C 		ENSDART00000074710 (PDGFC-201) 36788676-36892983 protein_coding
CIL_0006DW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000145431-ENSG00000109738 CGP 9606 4:156760454-157172090
GeneTranscriptPositionBiotype
ENSG00000109738 (GLRB)
glycine receptor, beta 		ENST00000264428 (GLRB-001) 157076057-157172090 protein_coding
ENST00000506411 (GLRB-003) 157076204-157138872 nonsense_mediated_decay
ENST00000509282 (GLRB-002) 157076403-157170806 protein_coding
ENST00000510970 (GLRB-006) 157136365-157138900 retained_intron
ENST00000512619 (GLRB-005) 157076195-157170905 protein_coding
ENST00000515642 (GLRB-004) 157076166-157136511 nonsense_mediated_decay
ENST00000541722 (GLRB-201) 157076125-157172090 protein_coding
ENSG00000145431 (PDGFC)
platelet derived growth factor C 		ENST00000274071 (PDGFC-002) 156761614-156971315 nonsense_mediated_decay
ENST00000422544 (PDGFC-009) 156763090-156970903 protein_coding
ENST00000502773 (PDGFC-001) 156760454-156971394 protein_coding
ENST00000504672 (PDGFC-007) 156762803-156773717 processed_transcript
ENST00000506880 (PDGFC-003) 156762948-156850272 nonsense_mediated_decay
ENST00000510982 (PDGFC-006) 156767782-156774478 processed_transcript
ENST00000511985 (PDGFC-008) 156770182-156810891 processed_transcript
ENST00000512711 (PDGFC-005) 156772789-156873972 processed_transcript
ENST00000513664 (PDGFC-004) 156967329-156970965 processed_transcript
ENSG00000248629 (RP11-154F14.2)
 ENST00000503505 (RP11-154F14.2-001) 156841359-156842236 antisense
ENSG00000252350 (RPPH1-3P)
ribonuclease P RNA component H1, 3 pseudogene 		ENST00000516541 (RPPH1-3P-201) 156986372-156986693 misc_RNA
ENSG00000278880 (RP11-612J15.1)
 ENST00000624427 (RP11-612J15.1-001) 156886645-156886862 TEC
ENSG00000280284 (RP11-154F14.3)
 ENST00000625017 (RP11-154F14.3-001) 156876435-156876820 TEC

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006DW_0001ENSDARG00000052769ENSDART00000074685ENSDART00000132907ENSDARG00000077588ENSDART00000074710CIL_0006DW_0002ENSG00000109738ENST00000264428ENST00000506411ENST00000509282ENST00000510970ENST00000512619ENST00000515642ENST00000541722ENSG00000145431ENST00000274071ENST00000422544ENST00000502773ENST00000504672ENST00000506880ENST00000510982ENST00000511985ENST00000512711ENST00000513664ENSG00000248629ENST00000503505ENSG00000252350ENST00000516541ENSG00000278880ENST00000624427ENSG00000280284ENST00000625017
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006DW_0001ENSDARG00000052769ENSDART00000074685ENSDART00000132907ENSDARG00000077588ENSDART00000074710CIL_0006DW_0002ENSG00000109738ENST00000264428ENST00000506411ENST00000509282ENST00000510970ENST00000512619ENST00000515642ENST00000541722ENSG00000145431ENST00000274071ENST00000422544ENST00000502773ENST00000504672ENST00000506880ENST00000510982ENST00000512711ENSG00000248629ENST00000503505ENSG00000252350ENST00000516541ENSG00000278880ENST00000624427ENSG00000280284ENST00000625017
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000052769 ENSDART00000074685 N/A N/A N/A 49.285±0.56 N/A N/A N/A N/A N/A N/A 2.361±0.00 N/A N/A N/A
ENSDART00000132907 N/A N/A N/A 8.171±0.07 N/A N/A 0.059±0.00 0.201±0.17 0.047±0.00 N/A N/A N/A N/A N/A
ENSDARG00000077588 ENSDART00000074710 N/A N/A N/A 1.157±0.81 N/A N/A 0.993±0.33 N/A 0.038±0.00 N/A 0.928±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000109738 ENST00000264428 0.054±0.00 0.716±0.00 N/A 13.361±4.61 N/A 1.002±0.00 0.197±0.00 N/A 0.298±0.20 N/A 0.049±0.00 0.247±0.18 0.136±0.06 0.259±0.09
ENST00000506411 N/A N/A 0.310±0.00 N/A 0.179±0.00 0.601±0.00 0.640±0.00 0.245±0.00 N/A N/A N/A N/A N/A N/A
ENST00000509282 0.179±0.00 1.005±0.00 N/A 14.580±0.00 1.381±0.00 0.997±0.00 0.921±0.76 0.561±0.00 N/A 0.441±0.24 0.182±0.00 0.463±0.25 0.774±0.18 0.421±0.04
ENST00000510970 N/A N/A 0.558±0.00 N/A N/A N/A N/A N/A N/A 1.315±0.00 0.385±0.00 0.107±0.00 N/A N/A
ENST00000512619 N/A N/A N/A N/A N/A N/A N/A N/A 0.274±0.00 0.833±0.00 N/A N/A 0.419±0.00 N/A
ENST00000515642 0.324±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.393±0.00 N/A N/A N/A N/A
ENST00000541722 0.066±0.00 N/A N/A N/A 0.362±0.00 0.289±0.00 0.504±0.00 0.412±0.00 0.126±0.00 0.263±0.00 N/A 0.059±0.00 0.174±0.00 0.374±0.00
ENSG00000145431 ENST00000274071 3.315±0.00 3.292±0.00 2.739±0.00 1.318±0.06 5.351±1.10 1.248±0.00 2.113±1.35 2.713±0.26 2.371±1.04 1.667±0.72 2.230±0.00 4.732±2.67 3.887±0.93 2.233±1.45
ENST00000422544 3.750±0.00 N/A N/A 1.040±0.00 N/A N/A N/A N/A N/A N/A 0.286±0.00 1.243±0.00 3.618±0.00 0.816±0.00
ENST00000502773 N/A N/A N/A N/A N/A 0.460±0.00 0.170±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000504672 N/A N/A N/A 1.903±0.00 N/A 1.745±0.00 N/A N/A N/A 2.846±0.00 2.749±0.00 N/A N/A N/A
ENST00000506880 N/A N/A N/A N/A N/A N/A N/A N/A 2.787±0.00 N/A N/A N/A N/A N/A
ENST00000510982 N/A N/A N/A N/A N/A N/A 2.180±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000511985 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.724±0.00
ENST00000513664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000248629 ENST00000503505 N/A 0.272±0.00 N/A 0.272±0.00 N/A N/A 0.126±0.09 0.629±0.23 N/A 0.092±0.00 N/A 0.653±0.25 N/A N/A
ENSG00000252350 ENST00000516541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.216±0.00
ENSG00000278880 ENST00000624427 N/A 0.136±0.00 N/A N/A N/A N/A N/A N/A N/A 0.440±0.00 N/A N/A N/A 1.765±0.00
ENSG00000280284 ENST00000625017 N/A N/A N/A N/A 0.093±0.00 N/A N/A N/A N/A 0.727±0.00 N/A N/A N/A 0.093±0.00

Loading