C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycine receptor, beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000506411 GLRB-003 ENSG00000109738 9606 + 4:157076204-157138872 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyENST00000506411
Transcript ID Bladder Breast Colon Heart Kidney
ENST00000506411 0.310±0.00 0.179±0.00 0.601±0.00 0.640±0.00 0.245±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006DW CIL_0006DW_0002 CGP 4:156760454-157172090
CIL_0006DX CIL_0006DX_0002 CGP 4:157076057-157366075

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107743 Glrb-003 protein_coding Mus_musculus 0 671
ENSMUST00000029654 Glrb-001 protein_coding Mus_musculus 0 671
ENSMUST00000135043 Glrb-004 nonsense_mediated_decay Mus_musculus 0 664
ENSMUST00000132330 Glrb-002 nonsense_mediated_decay Mus_musculus 0 270
ENSDART00000005499 glra1-201 protein_coding Danio_rerio 1e-25 121
ENSDART00000066197 glra1-203 protein_coding Danio_rerio 2e-23 113
ENSDART00000047680 glra1-202 protein_coding Danio_rerio 2e-23 113
ENSDART00000136733 glra1-001 protein_coding Danio_rerio 2e-23 113

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