C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006IH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000102265-ENSG00000126759 CGP 9606 X:47582313-47630305
GeneTranscriptPositionBiotype
ENSG00000008056 (SYN1)
synapsin I
ENST00000295987 (SYN1-001) 47571898-47619853 protein_coding
ENST00000340666 (SYN1-002) 47571904-47619853 protein_coding
ENSG00000102265 (TIMP1)
TIMP metallopeptidase inhibitor 1
ENST00000218388 (TIMP1-001) 47582313-47586789 protein_coding
ENST00000377017 (TIMP1-003) 47582450-47586789 protein_coding
ENST00000441738 (TIMP1-004) 47582509-47585254 protein_coding
ENST00000445623 (TIMP1-005) 47585342-47586789 protein_coding
ENST00000456754 (TIMP1-002) 47582408-47586023 protein_coding
ENSG00000126759 (CFP)
complement factor properdin
ENST00000247153 (CFP-201) 47624214-47630305 protein_coding
ENST00000377005 (CFP-002) 47625988-47629965 protein_coding
ENST00000396992 (CFP-001) 47624214-47629965 protein_coding
ENST00000469388 (CFP-006) 47626807-47629895 protein_coding
ENST00000478222 (CFP-004) 47624213-47626580 retained_intron
ENST00000480317 (CFP-005) 47628122-47629952 processed_transcript
ENST00000485991 (CFP-003) 47624559-47629895 retained_intron
CIL_0006IH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000001131-ENSMUSG00000001128 CGP 10090 X:20870166-20931555
GeneTranscriptPositionBiotype
ENSMUSG00000001128 (Cfp)
complement factor properdin
ENSMUST00000001156 (Cfp-001) 20925454-20931555 protein_coding
ENSMUST00000122862 (Cfp-002) 20925651-20927614 processed_transcript
ENSMUSG00000001131 (Timp1)
tissue inhibitor of metalloproteinase 1
ENSMUST00000009530 (Timp1-001) 20870221-20874735 protein_coding
ENSMUST00000115342 (Timp1-002) 20870166-20874733 protein_coding
ENSMUSG00000037217 (Syn1)
synapsin I
ENSMUST00000081893 (Syn1-201) 20860515-20920918 protein_coding
ENSMUST00000115345 (Syn1-001) 20860511-20921004 protein_coding
ENSMUSG00000080757 (Gm15029)
predicted gene 15029
ENSMUST00000119742 (Gm15029-001) 20911596-20911794 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006IH_0001ENSG00000008056ENST00000295987ENST00000340666ENSG00000102265ENST00000218388ENST00000377017ENST00000441738ENST00000445623ENST00000456754ENSG00000126759ENST00000247153ENST00000377005ENST00000396992ENST00000469388ENST00000478222ENST00000480317ENST00000485991CIL_0006IH_0002ENSMUSG00000001128ENSMUST00000001156ENSMUST00000122862ENSMUSG00000001131ENSMUST00000009530ENSMUST00000115342ENSMUSG00000037217ENSMUST00000081893ENSMUST00000115345ENSMUSG00000080757ENSMUST00000119742
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006IH_0001ENSG00000008056ENST00000295987ENST00000340666ENSG00000102265ENST00000218388ENST00000377017ENST00000441738ENSG00000126759ENST00000247153ENST00000377005ENST00000396992ENST00000469388ENST00000478222ENST00000485991CIL_0006IH_0002ENSMUSG00000001128ENSMUST00000001156ENSMUST00000122862ENSMUSG00000001131ENSMUST00000009530ENSMUST00000115342ENSMUSG00000037217ENSMUST00000081893ENSMUST00000115345ENSMUSG00000080757ENSMUST00000119742
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000008056 ENST00000295987 N/A N/A N/A 40.116±36.95 N/A 2.398±0.00 5.258±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000340666 N/A N/A N/A 46.281±37.14 N/A 0.334±0.00 N/A N/A 6.212±0.00 N/A N/A N/A N/A 2.091±1.38
ENSG00000102265 ENST00000218388 94.243±0.00 340.355±0.00 1.310±0.00 10.945±10.14 33.576±16.07 94.976±91.39 44.972±42.89 37.835±32.01 217.627±212.49 455.120±449.60 29.015±0.00 231.537±283.96 288.974±235.16 194.961±162.18
ENST00000377017 N/A 339.942±0.00 N/A N/A 27.915±0.00 N/A N/A 70.244±64.14 76.538±0.00 N/A 2.703±0.00 11.485±0.67 139.313±0.00 80.033±71.63
ENST00000441738 N/A N/A 1.881±0.00 N/A 15.267±0.00 1.559±0.00 N/A N/A 3.883±0.00 N/A 4.473±0.00 N/A N/A N/A
ENST00000445623 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000126759 ENST00000247153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.369±0.00 N/A N/A
ENST00000377005 3.575±0.00 1.010±0.00 N/A 0.154±0.00 N/A 0.349±0.00 N/A N/A N/A N/A N/A 0.569±0.00 N/A 0.767±0.00
ENST00000396992 N/A 1.591±0.00 N/A N/A 1.084±0.34 N/A 0.369±0.00 3.468±0.00 2.965±0.00 3.078±2.42 0.243±0.00 0.405±0.36 3.419±0.38 N/A
ENST00000469388 N/A N/A 0.081±0.00 N/A N/A N/A 0.187±0.08 N/A N/A N/A N/A 0.305±0.00 1.172±0.00 N/A
ENST00000478222 15.382±0.00 9.090±0.00 N/A N/A 3.178±0.00 1.807±0.00 0.435±0.00 4.356±0.00 7.342±0.00 7.079±0.00 N/A 1.223±0.86 2.401±0.82 1.472±0.00
ENST00000480317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485991 N/A 0.550±0.00 N/A 0.026±0.00 N/A 0.355±0.00 0.036±0.00 0.207±0.04 0.352±0.00 0.065±0.00 N/A 0.116±0.13 0.075±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001128 ENSMUST00000001156 11.800±3.39 4.714±1.32 15.508±1.61 6.810±5.08 38.269±11.35 8.554±1.34 3.098±1.58 2.070±0.91 18.055±10.52 12.015±2.42 1.440±0.49 9.063±3.60 2.109±2.51 0.280±0.02
ENSMUST00000122862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.053±0.12 N/A 0.851±0.00 0.409±0.00
ENSMUSG00000001131 ENSMUST00000009530 3.614±1.73 7.404±0.73 3.648±0.33 0.796±0.04 3.068±0.34 1.794±0.84 1.602±0.69 0.314±0.14 0.504±0.29 2.925±0.17 0.442±0.24 78.889±20.50 6.997±3.67 0.632±0.20
ENSMUST00000115342 5.276±2.02 14.104±3.03 5.193±1.04 0.820±0.14 6.034±0.49 3.054±0.64 3.141±0.63 0.659±0.27 0.624±0.39 5.099±1.15 0.420±0.09 88.298±45.23 7.251±3.99 0.727±0.27
ENSMUSG00000037217 ENSMUST00000081893 N/A N/A N/A 75.768±63.73 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000115345 N/A N/A N/A 11.949±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000080757 ENSMUST00000119742 N/A N/A N/A 1.166±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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