C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13525
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120607 Gm13525-001 ENSMUSG00000082879 10090 + 2:49680499-49680976 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainPlacentaENSMUST00000120607
Transcript ID Adipose Brain Placenta
ENSMUST00000120607 0.369±0.00 0.398±0.12 0.082±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ME CIL_0006ME_0002 CGP 2:49451486-49774778
CIL_0006MF CIL_0006MF_0002 CGP 2:49619298-49948849

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272274 RPL21-003 protein_coding Homo_sapiens 0 510
ENST00000311549 RPL21-001 protein_coding Homo_sapiens 0 510
ENST00000319826 RPL21-004 protein_coding Homo_sapiens 0 510
ENST00000326092 RPL21-005 protein_coding Homo_sapiens 0 510
ENST00000396599 RPL21P75-001 processed_pseudogene Homo_sapiens 0 505
ENST00000397467 RPL21P17-001 processed_pseudogene Homo_sapiens 0 433
ENST00000401964 RP11-569A2.2-001 processed_pseudogene Homo_sapiens 4e-25 117
ENST00000402896 RPL21P67-001 processed_pseudogene Homo_sapiens 0 351
ENST00000404609 RP3-393E18.1-001 processed_pseudogene Homo_sapiens 0 435
ENST00000406094 RPL21P65-001 processed_pseudogene Homo_sapiens 0 326
ENST00000416622 RP11-329A14.2-001 processed_pseudogene Homo_sapiens 0 370
ENST00000423231 RP11-26H16.1-001 processed_pseudogene Homo_sapiens 0 455
ENST00000425440 RPL21P43-001 processed_pseudogene Homo_sapiens 0 303
ENST00000426566 RPL21P66-001 processed_pseudogene Homo_sapiens 0 272
ENST00000437724 AC096775.2-001 processed_pseudogene Homo_sapiens 0 279
ENST00000439130 RP11-244N20.7-001 processed_pseudogene Homo_sapiens 0 364
ENST00000441274 RP11-490K7.1-001 processed_pseudogene Homo_sapiens 0 372
ENST00000453468 RPL21P134-001 processed_pseudogene Homo_sapiens 0 455
ENST00000459863 RPL21P41-001 processed_pseudogene Homo_sapiens 0 291
ENST00000461458 RPL21P11-001 processed_pseudogene Homo_sapiens 0 483
ENST00000461690 RPL21-007 nonsense_mediated_decay Homo_sapiens 0 479
ENST00000465598 RPL21P71-001 processed_pseudogene Homo_sapiens 0 237
ENST00000466550 RPL21-006 retained_intron Homo_sapiens 0 289
ENST00000472093 RP11-267J23.1-001 processed_pseudogene Homo_sapiens 0 294
ENST00000472300 RP11-16F15.2-001 processed_pseudogene Homo_sapiens 0 477
ENST00000473558 RPL21-002 retained_intron Homo_sapiens 2e-33 147
ENST00000473808 RP11-254G11.1-001 processed_pseudogene Homo_sapiens 0 440
ENST00000477341 RP11-734J24.1-001 processed_pseudogene Homo_sapiens 0 486
ENST00000479116 RP11-73B8.1-001 processed_pseudogene Homo_sapiens 0 418
ENST00000482506 RPL21P116-001 processed_pseudogene Homo_sapiens 0 449
ENST00000482905 RPL21P120-001 processed_pseudogene Homo_sapiens 0 424
ENST00000483765 RPL21-008 nonsense_mediated_decay Homo_sapiens 0.00000000000004 82
ENST00000485147 RP11-407P2.1-001 processed_pseudogene Homo_sapiens 0 464
ENST00000485945 RP11-613M5.2-001 processed_pseudogene Homo_sapiens 0 486
ENST00000486753 RP11-48B14.1-001 processed_pseudogene Homo_sapiens 0 472
ENST00000491435 RP11-50D9.1-001 processed_pseudogene Homo_sapiens 0 486
ENST00000493317 RPL21-009 protein_coding Homo_sapiens 0 398
ENST00000493466 RP11-9D8.1-001 processed_pseudogene Homo_sapiens 0 412
ENST00000494303 RP11-366M4.1-001 processed_pseudogene Homo_sapiens 0 453
ENST00000495531 RP11-572P18.1-001 processed_pseudogene Homo_sapiens 0 510
ENST00000497298 RPL21P131-001 processed_pseudogene Homo_sapiens 0 455
ENST00000497954 RPL21P4-001 processed_pseudogene Homo_sapiens 0 451
ENST00000510061 AC006445.7-001 processed_pseudogene Homo_sapiens 0 346
ENST00000515262 HSPA4L-005 processed_transcript Homo_sapiens 0 200
ENST00000557463 RPL21P7-001 processed_pseudogene Homo_sapiens 0 416
ENST00000559810 RPL21P12-001 processed_pseudogene Homo_sapiens 0 300
ENST00000610672 MED22-007 protein_coding Homo_sapiens 0 364

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