C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006MZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000006007-ENSG00000103540 CGP 9606 16:19501689-19553408
GeneTranscriptPositionBiotype
ENSG00000006007 (GDE1)
glycerophosphodiester phosphodiesterase 1 		ENST00000353258 (GDE1-001) 19501689-19522145 protein_coding
ENST00000563645 (GDE1-005) 19503101-19505132 retained_intron
ENST00000564172 (GDE1-002) 19502383-19522123 nonsense_mediated_decay
ENST00000569773 (GDE1-003) 19507685-19521588 protein_coding
ENST00000569899 (GDE1-004) 19503861-19517168 protein_coding
ENSG00000103540 (CCP110)
centriolar coiled coil protein 110kDa 		ENST00000381396 (CCP110-002) 19523857-19553408 protein_coding
ENST00000396208 (CCP110-201) 19527836-19553400 protein_coding
ENST00000396212 (CCP110-001) 19523811-19553408 protein_coding
ENST00000561888 (CCP110-009) 19527921-19536197 protein_coding
ENST00000562083 (CCP110-004) 19523961-19542066 nonsense_mediated_decay
ENST00000562616 (CCP110-006) 19546849-19551622 retained_intron
ENST00000565376 (CCP110-008) 19523939-19528031 protein_coding
ENST00000566523 (CCP110-005) 19545142-19546565 retained_intron
ENST00000567451 (CCP110-007) 19547732-19551477 retained_intron
ENST00000569190 (CCP110-003) 19523879-19527169 retained_intron
ENST00000573412 (CCP110-010) 19523942-19525799 processed_transcript
ENSG00000260934 (CTA-363E6.7)
 ENST00000569345 (CTA-363E6.7-001) 19501689-19502286 antisense
CIL_0006MZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033917-ENSMUSG00000033904 CGP 10090 7:118688545-118737024
GeneTranscriptPositionBiotype
ENSMUSG00000033904 (Ccp110)
centriolar coiled coil protein 110 		ENSMUST00000038650 (Ccp110-201) 118715374-118737021 protein_coding
ENSMUST00000106557 (Ccp110-001) 118712552-118737024 protein_coding
ENSMUST00000123178 (Ccp110-002) 118721615-118737016 retained_intron
ENSMUST00000140831 (Ccp110-004) 118730251-118732462 retained_intron
ENSMUST00000149056 (Ccp110-003) 118725965-118737024 retained_intron
ENSMUSG00000033917 (Gde1)
glycerophosphodiester phosphodiesterase 1 		ENSMUST00000038791 (Gde1-001) 118688545-118705778 protein_coding
ENSMUST00000132509 (Gde1-002) 118691583-118705380 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006MZ_0001ENSG00000006007ENST00000353258ENST00000563645ENST00000564172ENST00000569773ENST00000569899ENSG00000103540ENST00000381396ENST00000396208ENST00000396212ENST00000561888ENST00000562083ENST00000562616ENST00000565376ENST00000566523ENST00000567451ENST00000569190ENST00000573412ENSG00000260934ENST00000569345CIL_0006MZ_0002ENSMUSG00000033904ENSMUST00000038650ENSMUST00000106557ENSMUST00000123178ENSMUST00000140831ENSMUST00000149056ENSMUSG00000033917ENSMUST00000038791ENSMUST00000132509
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006MZ_0001ENSG00000006007ENST00000353258ENST00000563645ENST00000564172ENST00000569899ENSG00000103540ENST00000381396ENST00000396208ENST00000396212ENSG00000260934ENST00000569345CIL_0006MZ_0002ENSMUSG00000033904ENSMUST00000038650ENSMUST00000106557ENSMUST00000123178ENSMUST00000149056ENSMUSG00000033917ENSMUST00000038791ENSMUST00000132509
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000006007 ENST00000353258 2.199±0.00 2.528±0.00 0.915±0.00 2.911±0.88 3.187±1.85 2.190±0.00 2.824±1.71 3.149±0.00 1.473±0.00 3.090±0.33 0.948±0.34 4.655±1.23 7.542±0.53 3.606±0.89
ENST00000563645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.757±0.00 N/A 8.748±0.00 8.496±0.00
ENST00000564172 N/A 8.703±0.00 0.904±0.00 10.870±6.63 4.121±0.00 11.724±5.53 15.205±11.39 8.322±5.12 4.665±2.32 11.731±0.00 2.812±0.05 8.554±4.94 13.877±3.56 12.717±0.00
ENST00000569773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569899 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.846±0.00 N/A N/A N/A
ENSG00000103540 ENST00000381396 0.928±0.00 1.245±0.00 N/A 3.420±2.65 1.123±0.00 0.441±0.12 0.345±0.00 1.010±0.00 0.775±0.00 0.719±0.00 0.612±0.00 1.125±0.70 0.456±0.00 5.370±0.00
ENST00000396208 0.992±0.00 N/A 0.704±0.00 2.270±0.00 0.411±0.00 1.784±0.00 1.587±0.00 0.628±0.00 0.379±0.00 N/A 0.559±0.00 0.839±0.21 0.771±0.09 1.372±0.00
ENST00000396212 N/A N/A N/A 1.185±0.43 0.414±0.00 0.722±0.00 N/A 0.314±0.00 0.194±0.08 2.150±1.36 N/A 0.934±0.67 N/A 3.914±0.50
ENST00000561888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000260934 ENST00000569345 11.046±0.00 9.848±0.00 N/A 18.562±0.00 25.797±0.00 22.573±0.00 26.986±0.00 17.174±0.00 12.462±0.00 16.931±0.00 7.458±0.00 18.092±0.00 16.881±1.43 12.964±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033904 ENSMUST00000038650 N/A N/A N/A 3.795±0.00 N/A N/A N/A 0.545±0.00 N/A N/A N/A N/A 0.620±0.09 17.153±0.00
ENSMUST00000106557 N/A N/A 1.461±0.00 6.500±1.62 N/A 0.164±0.00 0.123±0.03 0.589±0.20 2.748±2.12 N/A 0.303±0.15 3.008±0.00 1.072±0.39 21.905±2.40
ENSMUST00000123178 0.675±0.00 0.279±0.00 2.325±0.00 4.759±2.34 0.469±0.19 0.252±0.08 N/A 0.346±0.10 1.875±1.00 N/A 0.146±0.03 1.166±0.62 0.574±0.25 4.518±0.04
ENSMUST00000140831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149056 N/A N/A 1.258±0.00 N/A N/A N/A N/A N/A 1.747±0.88 N/A 0.178±0.00 N/A N/A N/A
ENSMUSG00000033917 ENSMUST00000038791 58.259±2.04 193.738±36.53 55.620±4.71 50.120±11.70 67.337±23.04 82.790±12.42 22.536±2.62 85.227±11.27 22.962±3.12 105.400±21.55 25.789±3.64 93.359±29.31 30.293±14.02 58.534±19.26
ENSMUST00000132509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.992±0.06 16.931±0.00 11.273±0.00

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