C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycerophosphodiester phosphodiesterase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000564172 GDE1-002 ENSG00000006007 9606 - 16:19502383-19522123 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000564172
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000564172 8.703±0.00 0.904±0.00 10.870±6.63 4.121±0.00 11.724±5.53 15.205±11.39 8.322±5.12 4.665±2.32 11.731±0.00 2.812±0.05 8.554±4.94 13.877±3.56 12.717±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MY CIL_0006MY_0001 CGP 16:19410496-19522145
CIL_0006MZ CIL_0006MZ_0001 CGP 16:19501689-19553408

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006071 IEA glycerol metabolic process
GO:0006629 IEA lipid metabolic process
GO:0008081 IEA phosphoric diester hydrolase activity
GO:0008889 IEA glycerophosphodiester phosphodiesterase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038791 Gde1-001 protein_coding Mus_musculus 0 1151
ENSMUST00000174545 Xpo4-001 protein_coding Mus_musculus 0.0001 53

Loading