C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006PV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000196586-ENSG00000112706 CGP 9606 6:75749192-76072678
GeneTranscriptPositionBiotype
ENSG00000196586 (MYO6)
myosin VI 		ENST00000369975 (MYO6-003) 75817523-75916612 protein_coding
ENST00000369977 (MYO6-002) 75749332-75916612 protein_coding
ENST00000369981 (MYO6-201) 75749192-75919537 protein_coding
ENST00000369985 (MYO6-001) 75749209-75919536 protein_coding
ENST00000430435 (MYO6-005) 75890210-75908560 protein_coding
ENST00000462633 (MYO6-004) 75867060-75881818 processed_transcript
ENST00000615563 (MYO6-202) 75817516-75915217 protein_coding
ENSG00000252156 (RNU6-155P)
RNA, U6 small nuclear 155, pseudogene 		ENST00000516347 (RNU6-155P-201) 75768059-75768158 snRNA
CIL_0006PV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033577-ENSMUSG00000032343 CGP 10090 9:80165031-80465481
GeneTranscriptPositionBiotype
ENSMUSG00000032343 (Impg1)
interphotoreceptor matrix proteoglycan 1 		ENSMUST00000085289 (Impg1-201) 80313330-80465438 protein_coding
ENSMUST00000113250 (Impg1-001) 80313995-80465481 protein_coding
ENSMUST00000185068 (Impg1-002) 80383535-80465438 protein_coding
ENSMUSG00000033577 (Myo6)
myosin VI 		ENSMUST00000035889 (Myo6-001) 80165031-80311729 protein_coding
ENSMUST00000076140 (Myo6-003) 80217637-80311729 protein_coding
ENSMUST00000113266 (Myo6-004) 80217629-80311729 protein_coding
ENSMUST00000113268 (Myo6-002) 80165040-80311728 protein_coding
ENSMUST00000127779 (Myo6-014) 80217611-80308050 protein_coding
ENSMUST00000130496 (Myo6-005) 80262047-80266671 retained_intron
ENSMUST00000138650 (Myo6-009) 80306914-80308602 retained_intron
ENSMUST00000139981 (Myo6-007) 80286281-80292611 retained_intron
ENSMUST00000143804 (Myo6-008) 80305771-80307795 processed_transcript
ENSMUST00000156199 (Myo6-006) 80285414-80286508 retained_intron
ENSMUST00000183377 (Myo6-011) 80165038-80168028 retained_intron
ENSMUST00000184480 (Myo6-012) 80165227-80308097 protein_coding
ENSMUSG00000099016 (Gm27227)
predicted gene 27227 		ENSMUST00000183413 (Gm27227-001) 80263306-80265450 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006PV_0001ENSG00000196586ENST00000369975ENST00000369977ENST00000369981ENST00000369985ENST00000430435ENST00000462633ENST00000615563ENSG00000252156ENST00000516347CIL_0006PV_0002ENSMUSG00000032343ENSMUST00000085289ENSMUST00000113250ENSMUST00000185068ENSMUSG00000033577ENSMUST00000035889ENSMUST00000076140ENSMUST00000113266ENSMUST00000113268ENSMUST00000127779ENSMUST00000130496ENSMUST00000138650ENSMUST00000139981ENSMUST00000143804ENSMUST00000156199ENSMUST00000183377ENSMUST00000184480ENSMUSG00000099016ENSMUST00000183413
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006PV_0001ENSG00000196586ENST00000369975ENST00000369977ENST00000369981ENST00000369985ENST00000462633ENST00000615563ENSG00000252156ENST00000516347CIL_0006PV_0002ENSMUSG00000032343ENSMUST00000085289ENSMUST00000113250ENSMUSG00000033577ENSMUST00000035889ENSMUST00000076140ENSMUST00000113266ENSMUST00000127779ENSMUST00000138650ENSMUST00000139981ENSMUST00000184480ENSMUSG00000099016ENSMUST00000183413
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000196586 ENST00000369975 2.344±0.00 1.113±0.00 2.290±0.00 N/A 2.010±1.04 2.325±0.72 0.457±0.23 3.447±3.05 1.420±0.04 2.012±1.07 0.201±0.00 2.455±0.89 1.011±0.10 4.712±1.28
ENST00000369977 N/A N/A N/A 2.745±0.00 1.053±0.00 N/A N/A 3.390±2.63 N/A 1.064±0.19 0.092±0.00 0.609±0.00 0.712±0.25 1.304±0.01
ENST00000369981 N/A N/A N/A 5.181±0.00 N/A 0.569±0.00 N/A 1.744±0.00 0.967±0.00 1.130±0.00 N/A 2.389±1.55 N/A 0.823±0.00
ENST00000369985 N/A N/A N/A 0.536±0.00 N/A 0.819±0.00 0.443±0.22 N/A 1.497±0.00 1.705±0.00 N/A 0.810±0.49 N/A 2.030±0.00
ENST00000430435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.114±0.00 N/A N/A N/A
ENST00000615563 3.327±0.00 0.992±0.00 1.792±0.00 2.253±1.05 1.931±0.00 N/A N/A 0.792±0.00 1.638±0.00 1.895±0.00 0.163±0.04 1.525±0.56 1.482±0.00 1.483±0.00
ENSG00000252156 ENST00000516347 N/A 0.220±0.00 N/A 0.427±0.00 N/A N/A 0.390±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032343 ENSMUST00000085289 0.013±0.00 N/A N/A 0.078±0.00 0.027±0.01 0.025±0.00 N/A 0.009±0.00 0.014±0.01 N/A N/A 0.072±0.04 N/A 0.085±0.07
ENSMUST00000113250 0.020±0.00 N/A 0.006±0.00 0.046±0.00 0.021±0.00 N/A N/A N/A 0.004±0.00 0.027±0.01 N/A 0.057±0.01 0.019±0.01 0.070±0.03
ENSMUST00000185068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000033577 ENSMUST00000035889 N/A 2.902±0.00 N/A 5.761±0.00 N/A 5.547±0.68 N/A N/A N/A 4.829±2.10 0.592±0.18 5.530±2.49 0.841±0.00 0.903±0.12
ENSMUST00000076140 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.300±0.00 2.132±0.00 N/A
ENSMUST00000113266 N/A N/A N/A N/A N/A 7.385±0.00 0.549±0.00 N/A 1.124±0.00 N/A 0.450±0.04 12.954±3.04 3.099±2.10 0.889±0.52
ENSMUST00000113268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127779 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.551±0.16 N/A N/A N/A
ENSMUST00000130496 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138650 4.712±1.54 8.698±0.47 3.762±0.00 N/A 3.771±0.45 20.109±4.25 N/A 23.958±2.45 3.202±1.80 9.534±0.34 1.829±0.12 14.018±1.41 14.172±8.67 N/A
ENSMUST00000139981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.044±0.00
ENSMUST00000143804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184480 N/A N/A N/A 8.641±0.00 N/A 8.520±0.00 N/A N/A N/A N/A N/A 10.577±0.00 2.151±0.01 0.622±0.00
ENSMUSG00000099016 ENSMUST00000183413 0.151±0.06 0.274±0.00 0.015±0.00 0.048±0.00 0.224±0.04 0.201±0.01 0.122±0.03 0.196±0.08 0.120±0.13 0.140±0.00 N/A 0.468±0.00 0.108±0.01 5.699±3.05

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