C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin VI
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369975 MYO6-003 ENSG00000196586 9606 + 6:75817523-75916612 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000369975
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000369975 2.344±0.00 1.113±0.00 2.290±0.00 2.010±1.04 2.325±0.72 0.457±0.23 3.447±3.05 1.420±0.04 2.012±1.07 0.201±0.00 2.455±0.89 1.011±0.10 4.712±1.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PS CIL_0006PS_0001 CGP 6:75601509-75919537
CIL_0006PV CIL_0006PV_0001 CGP 6:75749192-76072678

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003774 IEA motor activity
GO:0005524 IEA ATP binding
GO:0016459 IEA myosin complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113266 Myo6-004 protein_coding Mus_musculus 0 4549
ENSMUST00000035889 Myo6-001 protein_coding Mus_musculus 0 4440
ENSMUST00000127779 Myo6-014 protein_coding Mus_musculus 0 3742
ENSMUST00000184480 Myo6-012 protein_coding Mus_musculus 0 3740
ENSMUST00000113268 Myo6-002 protein_coding Mus_musculus 0 3740
ENSMUST00000076140 Myo6-003 protein_coding Mus_musculus 0 3722
ENSMUST00000156199 Myo6-006 retained_intron Mus_musculus 0 281

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