C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006TJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000162711-ENSG00000177535 CGP 9606 1:247416156-247451982
GeneTranscriptPositionBiotype
ENSG00000162711 (NLRP3)
NLR family, pyrin domain containing 3
ENST00000336119 (NLRP3-001) 247418049-247448817 protein_coding
ENST00000348069 (NLRP3-002) 247418049-247448817 protein_coding
ENST00000366496 (NLRP3-007) 247418052-247448817 protein_coding
ENST00000366497 (NLRP3-201) 247416156-247449102 protein_coding
ENST00000391827 (NLRP3-004) 247418795-247448504 protein_coding
ENST00000391828 (NLRP3-003) 247416156-247449108 protein_coding
ENST00000474792 (NLRP3-005) 247418620-247425792 processed_transcript
ENST00000532083 (NLRP3-006) 247443907-247448576 processed_transcript
ENSG00000177535 (OR2B11)
olfactory receptor, family 2, subfamily B, member 11
ENST00000318749 (OR2B11-001) 247451029-247451982 protein_coding
CIL_0006TJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032691-ENSMUSG00000059610 CGP 10090 11:59541568-59571738
GeneTranscriptPositionBiotype
ENSMUSG00000032691 (Nlrp3)
NLR family, pyrin domain containing 3
ENSMUST00000079476 (Nlrp3-001) 59541568-59566955 protein_coding
ENSMUST00000101148 (Nlrp3-201) 59542686-59566956 protein_coding
ENSMUST00000149126 (Nlrp3-002) 59542756-59548118 protein_coding
ENSMUSG00000059610 (Olfr222)
olfactory receptor 222
ENSMUST00000071943 (Olfr222-001) 59570782-59571738 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006TJ_0001ENSG00000162711ENST00000336119ENST00000348069ENST00000366496ENST00000366497ENST00000391827ENST00000391828ENST00000474792ENST00000532083ENSG00000177535ENST00000318749CIL_0006TJ_0002ENSMUSG00000032691ENSMUST00000079476ENSMUST00000101148ENSMUST00000149126ENSMUSG00000059610ENSMUST00000071943
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006TJ_0001ENSG00000162711ENST00000336119ENST00000348069ENST00000366497ENST00000391827ENST00000391828ENST00000474792ENST00000532083ENSG00000177535ENST00000318749CIL_0006TJ_0002ENSMUSG00000032691ENSMUST00000079476ENSMUST00000101148ENSMUSG00000059610ENSMUST00000071943
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000162711 ENST00000336119 1.253±0.00 0.305±0.00 N/A N/A 0.440±0.00 N/A 0.203±0.00 0.154±0.00 N/A 0.969±0.00 N/A 0.152±0.10 0.368±0.03 N/A
ENST00000348069 N/A N/A N/A 0.555±0.00 N/A N/A N/A N/A 0.280±0.18 0.470±0.02 0.178±0.00 N/A N/A 0.094±0.00
ENST00000366496 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000366497 N/A 0.154±0.00 N/A 0.166±0.00 N/A N/A N/A N/A N/A 0.307±0.00 N/A 0.175±0.00 N/A N/A
ENST00000391827 0.400±0.00 N/A N/A N/A N/A 0.036±0.00 N/A 0.231±0.00 N/A N/A N/A 0.141±0.09 N/A N/A
ENST00000391828 0.363±0.00 0.339±0.00 N/A 0.300±0.00 0.470±0.15 0.231±0.00 0.135±0.00 0.260±0.00 N/A 0.515±0.00 N/A 0.342±0.09 0.635±0.18 0.146±0.04
ENST00000474792 N/A N/A 0.110±0.00 N/A 0.746±0.00 N/A N/A N/A N/A N/A 0.020±0.00 0.443±0.00 N/A N/A
ENST00000532083 N/A 1.198±0.00 N/A 1.425±0.00 N/A N/A N/A N/A N/A 3.055±0.00 N/A 0.254±0.00 1.455±0.28 0.426±0.13
ENSG00000177535 ENST00000318749 0.023±0.00 N/A N/A N/A N/A 0.088±0.00 0.062±0.00 N/A N/A N/A N/A 0.068±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032691 ENSMUST00000079476 0.215±0.07 0.191±0.06 0.113±0.03 0.130±0.04 0.350±0.01 0.149±0.05 0.125±0.03 0.169±0.04 0.226±0.11 0.490±0.05 0.014±0.00 0.443±0.09 0.097±0.03 0.036±0.02
ENSMUST00000101148 N/A N/A 0.124±0.06 N/A 0.316±0.19 N/A N/A 0.190±0.00 0.285±0.12 0.616±0.29 0.033±0.00 0.431±0.11 0.081±0.06 N/A
ENSMUST00000149126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000059610 ENSMUST00000071943 0.029±0.00 N/A 0.009±0.00 N/A 0.035±0.00 N/A N/A N/A N/A N/A 0.077±0.00 N/A 0.006±0.00 0.069±0.03

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