C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006UB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000131095-ENSG00000186185 CGP 9606 17:44905008-44947711
GeneTranscriptPositionBiotype
ENSG00000131095 (GFAP)
glial fibrillary acidic protein
ENST00000253408 (GFAP-001) 44905626-44915552 protein_coding
ENST00000376990 (GFAP-004) 44911303-44915500 nonsense_mediated_decay
ENST00000435360 (GFAP-002) 44909667-44915494 protein_coding
ENST00000585543 (GFAP-014) 44907228-44911515 retained_intron
ENST00000585728 (GFAP-020) 44913313-44915500 nonsense_mediated_decay
ENST00000586125 (GFAP-019) 44908099-44910636 protein_coding
ENST00000586127 (GFAP-009) 44913352-44914376 protein_coding
ENST00000586793 (GFAP-024) 44910349-44915494 protein_coding
ENST00000587997 (GFAP-011) 44911268-44913696 protein_coding
ENST00000588037 (GFAP-006) 44913799-44915503 protein_coding
ENST00000588316 (GFAP-018) 44911697-44915488 protein_coding
ENST00000588640 (GFAP-012) 44908135-44912934 processed_transcript
ENST00000588735 (GFAP-008) 44906974-44915500 protein_coding
ENST00000588957 (GFAP-021) 44911674-44915951 protein_coding
ENST00000589701 (GFAP-017) 44906885-44908222 retained_intron
ENST00000590922 (GFAP-010) 44911672-44913698 retained_intron
ENST00000591327 (GFAP-007) 44913406-44915500 processed_transcript
ENST00000591719 (GFAP-013) 44911412-44912767 processed_transcript
ENST00000591880 (GFAP-015) 44907650-44910651 protein_coding
ENST00000592065 (GFAP-025) 44905008-44908114 processed_transcript
ENST00000592320 (GFAP-005) 44910619-44915504 protein_coding
ENST00000592706 (GFAP-016) 44906939-44909752 processed_transcript
ENST00000593179 (GFAP-023) 44915461-44916937 protein_coding
CIL_0006UB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020932-ENSMUSG00000051378 CGP 10090 11:102887336-102925124
GeneTranscriptPositionBiotype
ENSMUSG00000020932 (Gfap)
glial fibrillary acidic protein
ENSMUST00000067444 (Gfap-001) 102887336-102897131 protein_coding
ENSMUST00000077902 (Gfap-201) 102890166-102897200 protein_coding
ENSMUST00000127909 (Gfap-002) 102894487-102900912 processed_transcript
ENSMUSG00000051378 (Kif18b)
kinesin family member 18B
ENSMUST00000021311 (Kif18b-001) 102905529-102925124 protein_coding
ENSMUST00000132502 (Kif18b-002) 102916486-102925088 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006UB_0001ENSG00000131095ENST00000253408ENST00000376990ENST00000435360ENST00000585543ENST00000585728ENST00000586125ENST00000586127ENST00000586793ENST00000587997ENST00000588037ENST00000588316ENST00000588640ENST00000588735ENST00000588957ENST00000589701ENST00000590922ENST00000591327ENST00000591719ENST00000591880ENST00000592065ENST00000592320ENST00000592706ENST00000593179CIL_0006UB_0002ENSMUSG00000020932ENSMUST00000067444ENSMUST00000077902ENSMUST00000127909ENSMUSG00000051378ENSMUST00000021311ENSMUST00000132502
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006UB_0001ENSG00000131095ENST00000253408ENST00000585728CIL_0006UB_0002ENSMUSG00000020932ENSMUST00000067444ENSMUST00000077902ENSMUST00000127909ENSMUSG00000051378ENSMUST00000021311
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000131095 ENST00000253408 N/A N/A N/A 433.548±315.03 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000376990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585728 N/A N/A N/A 257.251±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586127 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591880 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592065 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592706 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020932 ENSMUST00000067444 0.356±0.31 0.344±0.09 N/A 12.354±17.32 0.192±0.07 1.752±0.41 0.070±0.01 0.099±0.03 4.538±6.30 0.117±0.05 N/A 0.375±0.16 0.059±0.02 1.131±1.04
ENSMUST00000077902 N/A N/A N/A 0.022±0.00 0.138±0.00 0.562±0.00 0.051±0.00 0.057±0.02 0.795±0.87 0.095±0.00 0.023±0.00 0.355±0.15 0.024±0.01 0.292±0.00
ENSMUST00000127909 0.071±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000051378 ENSMUST00000021311 1.099±0.82 0.618±0.17 0.289±0.03 3.491±2.86 0.657±0.33 3.152±0.25 0.083±0.02 0.099±0.03 9.208±10.08 0.319±0.08 0.022±0.01 3.182±1.13 4.352±2.95 9.426±2.78
ENSMUST00000132502 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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