C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: glial fibrillary acidic protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000253408 GFAP-001 ENSG00000131095 9606 - 17:44905626-44915552 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000253408
Transcript ID Brain
ENST00000253408 433.548±315.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006UA CIL_0006UA_0001 CGP 17:44849943-44905390
CIL_0006UB CIL_0006UB_0001 CGP 17:44905008-44947711

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005882 IEA intermediate filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067444 Gfap-001 protein_coding Mus_musculus 0 1487
ENSMUST00000077902 Gfap-201 protein_coding Mus_musculus 0 1325
ENSDART00000028270 gfap-001 protein_coding Danio_rerio 0 429
ENSMUST00000023720 Krt84-201 protein_coding Mus_musculus 9e-23 113
ENSDART00000137533 krt8-003 retained_intron Danio_rerio 0.00000000004 75
ENSDART00000081215 krt8-001 protein_coding Danio_rerio 0.00000000004 75

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