C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006WA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000022418-ENSDARG00000057610 CGP 7955 8:16794178-16931529
GeneTranscriptPositionBiotype
ENSDARG00000022418 (faf1)
Fas associated factor 1 		ENSDART00000034004 (faf1-001) 16794178-16925840 protein_coding
ENSDART00000115419 (faf1-201) 16794572-16925813 protein_coding
ENSDARG00000057610 (cdkn2c)
cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) 		ENSDART00000080315 (cdkn2c-201) 16928296-16931528 protein_coding
ENSDART00000133742 (cdkn2c-001) 16927284-16931529 protein_coding
CIL_0006WA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000185104-ENSG00000123080 CGP 9606 1:50439478-50974633
GeneTranscriptPositionBiotype
ENSG00000123080 (CDKN2C)
cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) 		ENST00000262662 (CDKN2C-001) 50960745-50974633 protein_coding
ENST00000371761 (CDKN2C-002) 50969944-50974558 protein_coding
ENST00000396148 (CDKN2C-201) 50968695-50974633 protein_coding
ENSG00000185104 (FAF1)
Fas (TNFRSF6) associated factor 1 		ENST00000371778 (FAF1-201) 50441276-50959793 protein_coding
ENST00000396153 (FAF1-001) 50439478-50960263 protein_coding
ENST00000472808 (FAF1-005) 50539592-50606944 processed_transcript
ENST00000487898 (FAF1-004) 50705784-50959738 processed_transcript
ENST00000494400 (FAF1-002) 50441276-50706051 nonsense_mediated_decay
ENSG00000225767 (RP5-850O15.3)
 ENST00000424664 (RP5-850O15.3-001) 50461469-50471150 antisense
ENSG00000230585 (PHBP12)
prohibitin pseudogene 12 		ENST00000453979 (PHBP12-001) 50780340-50781150 processed_pseudogene
ENSG00000237130 (MRPS6P2)
mitochondrial ribosomal protein S6 pseudogene 2 		ENST00000381143 (MRPS6P2-001) 50846468-50846837 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006WA_0001ENSDARG00000022418ENSDART00000034004ENSDART00000115419ENSDARG00000057610ENSDART00000080315ENSDART00000133742CIL_0006WA_0002ENSG00000123080ENST00000262662ENST00000371761ENST00000396148ENSG00000185104ENST00000371778ENST00000396153ENST00000472808ENST00000487898ENST00000494400ENSG00000225767ENST00000424664ENSG00000230585ENST00000453979ENSG00000237130ENST00000381143
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006WA_0001ENSDARG00000022418ENSDART00000034004ENSDART00000115419ENSDARG00000057610ENSDART00000080315ENSDART00000133742CIL_0006WA_0002ENSG00000123080ENST00000262662ENST00000371761ENST00000396148ENSG00000185104ENST00000371778ENST00000396153ENST00000472808ENST00000487898ENST00000494400ENSG00000225767ENST00000424664ENSG00000230585ENST00000453979ENSG00000237130ENST00000381143
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000022418 ENSDART00000034004 N/A N/A N/A 4.369±0.96 N/A N/A 5.145±1.97 6.941±0.00 0.536±0.00 N/A 1.780±0.00 N/A N/A N/A
ENSDART00000115419 N/A N/A N/A 2.697±0.70 N/A N/A 4.552±0.00 1.113±0.00 0.855±0.00 N/A 0.721±0.00 N/A N/A N/A
ENSDARG00000057610 ENSDART00000080315 N/A N/A N/A 3.679±0.81 N/A N/A 0.985±0.68 1.933±0.79 N/A N/A N/A N/A N/A N/A
ENSDART00000133742 N/A N/A N/A 1.644±0.92 N/A N/A 1.061±0.61 0.662±0.00 0.091±0.00 N/A 0.392±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000123080 ENST00000262662 N/A N/A N/A N/A N/A N/A N/A 0.432±0.00 0.227±0.00 N/A 0.327±0.00 0.223±0.00 N/A 0.642±0.00
ENST00000371761 3.579±0.00 2.000±0.00 0.224±0.00 0.746±0.37 8.834±5.79 4.835±3.06 1.349±0.48 1.371±0.30 2.815±1.72 2.110±1.46 1.574±0.13 2.237±1.32 2.595±0.00 2.482±1.03
ENST00000396148 5.519±0.00 3.171±0.00 0.471±0.00 3.156±2.52 15.990±15.50 4.508±3.33 2.676±2.56 2.600±0.00 1.232±0.26 2.897±2.45 0.371±0.00 5.688±4.37 4.681±0.25 5.109±3.52
ENSG00000185104 ENST00000371778 3.517±0.00 7.426±0.00 N/A 6.989±3.45 9.069±0.00 11.030±0.00 10.999±0.00 6.410±4.92 4.254±0.00 6.436±0.00 39.766±0.00 10.295±2.17 9.270±4.96 43.550±25.21
ENST00000396153 1.342±0.00 1.820±0.00 N/A 2.479±0.10 2.644±0.10 2.002±0.47 4.105±2.35 2.059±0.00 2.225±1.36 1.355±0.52 7.827±6.12 2.304±1.15 1.830±0.57 5.921±0.00
ENST00000472808 N/A N/A 3.015±0.00 9.736±0.00 4.614±0.00 5.937±0.00 2.722±0.00 2.719±0.00 N/A 3.711±0.00 4.225±0.00 N/A N/A N/A
ENST00000487898 N/A N/A N/A 6.805±0.00 8.059±0.00 9.591±0.00 6.171±0.00 4.337±0.00 11.201±0.00 11.339±0.00 8.129±0.00 7.448±0.00 N/A N/A
ENST00000494400 N/A 2.005±0.00 N/A 2.906±0.00 1.489±0.32 2.632±0.00 1.361±0.00 2.023±0.00 N/A 2.601±0.98 2.283±0.00 3.702±0.31 4.621±0.44 19.112±0.00
ENSG00000225767 ENST00000424664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.051±0.00 1.548±0.01
ENSG00000230585 ENST00000453979 0.054±0.00 0.058±0.00 N/A 0.254±0.00 0.126±0.11 0.544±0.44 0.187±0.15 0.618±0.56 0.485±0.00 0.664±0.58 0.472±0.33 0.048±0.00 0.117±0.00 0.064±0.02
ENSG00000237130 ENST00000381143 N/A N/A N/A N/A 1.075±0.00 1.133±0.00 0.575±0.00 N/A 1.382±0.00 N/A N/A N/A N/A N/A

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