C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006X1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000025974-ENSDARG00000078561 CGP 7955 6:47470470-47781054
GeneTranscriptPositionBiotype
ENSDARG00000025974 (MAGI3 (1 of 2))
membrane associated guanylate kinase, WW and PDZ domain containing 3 		ENSDART00000044487 (MAGI3 (1 of 2)-201) 47473462-47568281 protein_coding
ENSDART00000136726 (MAGI3 (1 of 2)-001) 47470470-47737578 protein_coding
CIL_0006X1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000052539-ENSMUSG00000032913 CGP 10090 3:104013259-104511856
GeneTranscriptPositionBiotype
ENSMUSG00000022187 (Gm5546)
predicted gene 5546 		ENSMUST00000056145 (Gm5546-001) 104350635-104366613 lincRNA
ENSMUSG00000032913 (Lrig2)
leucine-rich repeats and immunoglobulin-like domains 2 		ENSMUST00000046316 (Lrig2-201) 104453984-104511856 protein_coding
ENSMUSG00000052539 (Magi3)
membrane associated guanylate kinase, WW and PDZ domain containing 3 		ENSMUST00000064371 (Magi3-001) 104013259-104220374 protein_coding
ENSMUST00000121198 (Magi3-002) 104013625-104220103 protein_coding
ENSMUST00000122303 (Magi3-003) 104016469-104220238 protein_coding
ENSMUSG00000058388 (Phtf1)
putative homeodomain transcription factor 1 		ENSMUST00000055425 (Phtf1-003) 103968368-104007490 protein_coding
ENSMUST00000063717 (Phtf1-001) 103968258-104007488 protein_coding
ENSMUST00000090685 (Phtf1-007) 103968446-104007490 protein_coding
ENSMUST00000117150 (Phtf1-002) 103968110-104007488 protein_coding
ENSMUST00000123611 (Phtf1-010) 103968374-103991127 protein_coding
ENSMUST00000130385 (Phtf1-006) 103996420-103997565 retained_intron
ENSMUST00000145727 (Phtf1-004) 103968366-104024598 nonsense_mediated_decay
ENSMUST00000150090 (Phtf1-005) 103968372-104007488 retained_intron
ENSMUST00000150849 (Phtf1-008) 103968925-103997521 nonsense_mediated_decay
ENSMUST00000156262 (Phtf1-009) 103968588-103987561 protein_coding
ENSMUSG00000088016 (Gm23830)
predicted gene, 23830 		ENSMUST00000157391 (Gm23830-201) 104092381-104092482 snRNA
ENSMUSG00000088479 (Gm23077)
predicted gene, 23077 		ENSMUST00000157854 (Gm23077-201) 104201110-104201225 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006X1_0001ENSDARG00000025974ENSDART00000044487ENSDART00000136726CIL_0006X1_0002ENSMUSG00000022187ENSMUST00000056145ENSMUSG00000032913ENSMUST00000046316ENSMUSG00000052539ENSMUST00000064371ENSMUST00000121198ENSMUST00000122303ENSMUSG00000058388ENSMUST00000055425ENSMUST00000063717ENSMUST00000090685ENSMUST00000117150ENSMUST00000123611ENSMUST00000130385ENSMUST00000145727ENSMUST00000150090ENSMUST00000150849ENSMUST00000156262ENSMUSG00000088016ENSMUST00000157391ENSMUSG00000088479ENSMUST00000157854
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006X1_0001ENSDARG00000025974ENSDART00000044487ENSDART00000136726CIL_0006X1_0002ENSMUSG00000022187ENSMUST00000056145ENSMUSG00000032913ENSMUST00000046316ENSMUSG00000052539ENSMUST00000064371ENSMUST00000121198ENSMUST00000122303ENSMUSG00000058388ENSMUST00000055425ENSMUST00000063717ENSMUST00000090685ENSMUST00000117150ENSMUST00000123611ENSMUST00000145727ENSMUST00000150090ENSMUSG00000088016ENSMUST00000157391ENSMUSG00000088479ENSMUST00000157854
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000025974 ENSDART00000044487 N/A N/A N/A N/A N/A N/A 0.044±0.00 0.773±0.00 0.020±0.00 N/A N/A N/A N/A N/A
ENSDART00000136726 N/A N/A N/A 1.506±0.95 N/A N/A 0.085±0.00 N/A N/A N/A 0.128±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022187 ENSMUST00000056145 N/A N/A 0.014±0.00 0.017±0.00 0.025±0.00 N/A 0.028±0.00 0.014±0.00 N/A 0.130±0.04 N/A 0.098±0.05 0.012±0.01 0.075±0.04
ENSMUSG00000032913 ENSMUST00000046316 3.705±1.68 5.023±0.56 2.095±0.37 3.261±1.09 2.516±1.32 3.662±0.41 0.834±0.15 1.288±0.50 1.181±0.32 2.999±1.02 0.872±0.28 4.928±1.95 2.549±1.15 1.752±0.82
ENSMUSG00000052539 ENSMUST00000064371 1.412±0.23 3.541±0.82 2.351±0.28 3.495±1.18 1.630±0.12 7.872±1.50 5.041±0.25 1.550±0.13 1.508±0.93 7.082±2.83 0.283±0.04 4.448±2.23 5.192±2.04 0.639±0.20
ENSMUST00000121198 1.586±0.05 0.896±0.00 3.440±0.30 5.331±0.00 1.610±0.42 2.648±0.70 1.311±0.19 1.513±0.09 1.466±0.52 8.591±3.43 0.146±0.02 2.234±0.92 4.284±1.40 1.287±0.53
ENSMUST00000122303 N/A N/A N/A 2.188±0.00 1.349±0.00 N/A N/A N/A N/A N/A 0.151±0.04 1.731±0.00 N/A 1.804±0.49
ENSMUSG00000058388 ENSMUST00000055425 N/A 2.215±0.00 N/A 12.914±0.00 3.031±0.00 N/A 1.009±0.00 0.937±0.00 N/A N/A 0.665±0.00 7.538±4.65 13.051±6.60 21.596±0.00
ENSMUST00000063717 3.491±1.81 3.659±0.74 3.106±0.00 7.780±0.00 2.779±0.91 2.167±0.62 0.945±0.30 2.128±0.84 1.125±0.79 4.786±1.30 1.270±0.25 4.667±0.79 3.056±0.00 9.555±1.14
ENSMUST00000090685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.630±0.00 N/A N/A 8.621±0.00
ENSMUST00000117150 0.883±0.00 N/A 3.695±0.00 N/A N/A N/A N/A 1.716±0.18 1.702±0.97 N/A 1.033±0.00 11.212±0.00 6.114±4.68 9.510±0.71
ENSMUST00000123611 N/A 9.647±2.43 N/A 30.745±0.00 5.011±0.00 2.679±0.31 N/A N/A N/A N/A N/A 10.070±8.51 21.275±12.28 101.530±0.00
ENSMUST00000130385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145727 N/A N/A N/A N/A N/A 0.941±0.00 0.493±0.06 N/A 0.284±0.12 1.845±0.07 N/A 1.523±0.00 N/A N/A
ENSMUST00000150090 0.626±0.00 N/A N/A N/A 0.890±0.08 N/A 0.584±0.00 N/A N/A 1.568±0.00 N/A N/A N/A N/A
ENSMUST00000150849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000088016 ENSMUST00000157391 N/A N/A 128.658±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000088479 ENSMUST00000157854 923.117±0.00 2500.520±1168.81 N/A N/A N/A 3490.550±563.58 N/A N/A 19.792±10.46 813.405±0.00 N/A 6165.750±3030.25 N/A 1290.230±0.00

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