C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006YS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163251-ENSG00000178385 CGP 9606 2:207762586-208025560
GeneTranscriptPositionBiotype
ENSG00000163251 (FZD5)
frizzled class receptor 5
ENST00000295417 (FZD5-001) 207762586-207769563 protein_coding
ENSG00000178385 (PLEKHM3)
pleckstrin homology domain containing, family M, member 3
ENST00000427836 (PLEKHM3-001) 207828303-208025560 protein_coding
ENST00000447645 (PLEKHM3-003) 207851238-207977450 protein_coding
ENST00000457206 (PLEKHM3-002) 207900041-208025498 protein_coding
ENSG00000212246 (RNU6-360P)
RNA, U6 small nuclear 360, pseudogene
ENST00000390944 (RNU6-360P-201) 208019638-208019741 snRNA
ENSG00000225111 (AC083900.1)
ENST00000421964 (AC083900.1-001) 207868582-207869915 sense_intronic
ENSG00000244567 (AC096772.6)
ENST00000343987 (AC096772.6-001) 207821290-207822769 lincRNA
CIL_0006YS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000045005-ENSMUSG00000051344 CGP 10090 1:64730558-64956824
GeneTranscriptPositionBiotype
ENSMUSG00000045005 (Fzd5)
frizzled homolog 5 (Drosophila)
ENSMUST00000063982 (Fzd5-001) 64730558-64737751 protein_coding
ENSMUST00000116133 (Fzd5-002) 64734469-64737749 protein_coding
ENSMUSG00000051344 (Plekhm3)
pleckstrin homology domain containing, family M, member 3
ENSMUST00000097713 (Plekhm3-001) 64789121-64956824 protein_coding
ENSMUST00000123225 (Plekhm3-004) 64938021-64956775 protein_coding
ENSMUST00000134097 (Plekhm3-005) 64953163-64956727 processed_transcript
ENSMUST00000139649 (Plekhm3-002) 64785983-64956824 nonsense_mediated_decay
ENSMUST00000140857 (Plekhm3-003) 64860298-64928097 retained_intron
ENSMUST00000187188 (Plekhm3-006) 64793809-64836764 processed_transcript
ENSMUSG00000097264 (Rpl31-ps24)
ribosomal protein L31, pseudogene 24
ENSMUST00000181350 (Rpl31-ps24-001) 64934402-64934780 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006YS_0001ENSG00000163251ENST00000295417ENSG00000178385ENST00000427836ENST00000447645ENST00000457206ENSG00000212246ENST00000390944ENSG00000225111ENST00000421964ENSG00000244567ENST00000343987CIL_0006YS_0002ENSMUSG00000045005ENSMUST00000063982ENSMUST00000116133ENSMUSG00000051344ENSMUST00000097713ENSMUST00000123225ENSMUST00000134097ENSMUST00000139649ENSMUST00000140857ENSMUST00000187188ENSMUSG00000097264ENSMUST00000181350
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006YS_0001ENSG00000163251ENST00000295417ENSG00000178385ENST00000427836ENST00000447645ENST00000457206ENSG00000212246ENST00000390944ENSG00000225111ENST00000421964ENSG00000244567ENST00000343987CIL_0006YS_0002ENSMUSG00000045005ENSMUST00000063982ENSMUST00000116133ENSMUSG00000051344ENSMUST00000097713ENSMUST00000139649ENSMUST00000187188ENSMUSG00000097264ENSMUST00000181350
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163251 ENST00000295417 2.195±0.00 1.061±0.00 1.117±0.00 0.671±0.27 2.869±0.75 7.472±2.45 0.545±0.09 5.157±1.21 3.770±3.01 3.630±0.36 0.524±0.01 4.039±3.47 3.189±1.80 0.558±0.17
ENSG00000178385 ENST00000427836 N/A 0.309±0.00 N/A 3.647±0.00 2.162±0.33 1.768±1.31 0.446±0.00 0.243±0.04 0.820±0.49 1.464±0.81 0.562±0.12 0.335±0.23 0.660±0.14 1.598±0.38
ENST00000447645 N/A N/A N/A N/A N/A N/A N/A 0.216±0.00 N/A 0.131±0.00 0.614±0.00 N/A N/A N/A
ENST00000457206 N/A 0.218±0.00 N/A N/A N/A 0.308±0.00 N/A 0.224±0.00 0.046±0.00 0.094±0.00 N/A 0.441±0.10 0.039±0.00 N/A
ENSG00000212246 ENST00000390944 N/A N/A N/A N/A N/A N/A 0.190±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000225111 ENST00000421964 N/A 0.151±0.00 N/A 0.085±0.00 0.040±0.00 0.218±0.01 0.019±0.00 0.305±0.00 1.870±0.00 0.052±0.00 N/A 0.054±0.00 N/A 0.175±0.00
ENSG00000244567 ENST00000343987 N/A N/A N/A 1.769±0.00 N/A 2.057±0.53 1.351±0.00 0.813±0.00 N/A 1.085±0.00 0.678±0.55 N/A 0.368±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000045005 ENSMUST00000063982 1.413±0.43 1.903±0.36 1.623±0.25 0.297±0.15 0.625±0.21 12.670±0.79 0.521±0.19 2.104±0.65 1.515±0.94 4.515±0.63 0.319±0.08 1.379±0.39 2.795±1.13 0.441±0.06
ENSMUST00000116133 1.300±0.23 7.121±1.51 N/A 0.278±0.09 1.881±0.59 29.354±9.90 0.492±0.19 2.229±0.97 1.081±0.81 6.728±1.49 0.129±0.00 6.307±0.80 N/A 0.407±0.17
ENSMUSG00000051344 ENSMUST00000097713 1.327±0.65 2.375±0.53 1.310±0.08 1.396±0.19 1.245±0.36 0.526±0.23 0.775±0.53 1.058±0.38 0.252±0.13 3.648±1.39 0.742±0.20 1.790±0.78 1.077±0.46 0.829±0.29
ENSMUST00000123225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139649 0.901±0.00 N/A N/A N/A N/A N/A N/A N/A 0.105±0.00 N/A N/A N/A 0.442±0.24 0.110±0.00
ENSMUST00000140857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.826±0.00 2.473±0.00 N/A N/A
ENSMUSG00000097264 ENSMUST00000181350 0.157±0.00 0.309±0.00 N/A 0.241±0.00 0.588±0.32 N/A N/A 0.227±0.08 0.063±0.02 0.253±0.07 N/A 1.208±0.53 0.134±0.03 0.164±0.00

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