C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L31, pseudogene 24
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000181350 Rpl31-ps24-001 ENSMUSG00000097264 10090 + 1:64934402-64934780 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastKidneyLiverLungOvaryPlacentaTestisENSMUST00000181350
Transcript ID Adipose Adrenal Brain Breast Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000181350 0.157±0.00 0.309±0.00 0.241±0.00 0.588±0.32 0.227±0.08 0.063±0.02 0.253±0.07 1.208±0.53 0.134±0.03 0.164±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006YS CIL_0006YS_0002 CGP 1:64730558-64956824

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000075402 rpl31-201 protein_coding Danio_rerio 1e-37 159
ENSDART00000149851 rpl31-002 protein_coding Danio_rerio 1e-37 159
ENSDART00000149554 rpl31-001 protein_coding Danio_rerio 1e-37 159
ENSDART00000148688 rpl31-003 retained_intron Danio_rerio 5e-32 141
ENSDART00000148984 rpl31-004 retained_intron Danio_rerio 0.00000000006 71
ENST00000426558 RPL31P11-002 processed_transcript Homo_sapiens 0 296
ENST00000427776 RP11-458F8.3-001 processed_pseudogene Homo_sapiens 0 231
ENST00000431058 RPL31P35-001 processed_pseudogene Homo_sapiens 0 279
ENST00000441577 RP11-560I19.2-001 processed_pseudogene Homo_sapiens 0 281
ENST00000447680 RP11-346D6.4-001 processed_pseudogene Homo_sapiens 0 272
ENST00000454082 RPL31P11-001 transcribed_processed_pseudogene Homo_sapiens 0 296
ENST00000455434 RP11-420H19.3-001 processed_pseudogene Homo_sapiens 0 222
ENST00000462248 RP11-147I3.1-001 transcribed_processed_pseudogene Homo_sapiens 0 231
ENST00000487111 RP11-147I3.1-003 processed_transcript Homo_sapiens 5e-38 161
ENST00000498412 RP1-102E24.1-001 processed_pseudogene Homo_sapiens 0 285
ENST00000518463 RP11-267M23.6-001 processed_pseudogene Homo_sapiens 0 189
ENST00000525104 RP11-147I3.1-002 processed_transcript Homo_sapiens 0 231
ENST00000529570 RP11-147I3.1-004 processed_transcript Homo_sapiens 0 231

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