C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00071E_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000134443-ENSG00000134438 CGP 9606 18:59220168-59274086
GeneTranscriptPositionBiotype
ENSG00000134438 (RAX)
retina and anterior neural fold homeobox 		ENST00000256852 (RAX-002) 59267035-59273385 protein_coding
ENST00000334889 (RAX-001) 59267035-59273393 protein_coding
ENST00000555288 (RAX-003) 59272985-59274086 protein_coding
ENST00000591550 (RAX-004) 59272418-59272920 retained_intron
ENSG00000134443 (GRP)
gastrin-releasing peptide 		ENST00000256857 (GRP-001) 59220168-59230771 protein_coding
ENST00000420468 (GRP-002) 59220266-59230621 protein_coding
ENST00000456142 (GRP-004) 59225492-59230774 protein_coding
ENST00000529320 (GRP-003) 59220172-59230770 protein_coding
ENST00000530323 (GRP-005) 59225667-59230766 protein_coding
CIL_00071E_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024517-ENSMUSG00000024518 CGP 10090 18:65872820-65939089
GeneTranscriptPositionBiotype
ENSMUSG00000024517 (Grp)
gastrin releasing peptide 		ENSMUST00000025395 (Grp-201) 65873494-65886578 protein_coding
ENSMUST00000173530 (Grp-002) 65873484-65880258 protein_coding
ENSMUST00000173985 (Grp-001) 65872820-65886579 protein_coding
ENSMUSG00000024518 (Rax)
retina and anterior neural fold homeobox 		ENSMUST00000025396 (Rax-201) 65934639-65939089 protein_coding
ENSMUSG00000097907 (Raxos1)
retina and anterior neural fold homeobox, opposite strand 1 		ENSMUST00000181100 (Raxos1-201) 65937538-65940447 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00071E_0001ENSG00000134438ENST00000256852ENST00000334889ENST00000555288ENST00000591550ENSG00000134443ENST00000256857ENST00000420468ENST00000456142ENST00000529320ENST00000530323CIL_00071E_0002ENSMUSG00000024517ENSMUST00000025395ENSMUST00000173530ENSMUST00000173985ENSMUSG00000024518ENSMUST00000025396ENSMUSG00000097907ENSMUST00000181100
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00071E_0001ENSG00000134438ENST00000256852ENST00000555288ENSG00000134443ENST00000256857ENST00000420468ENST00000456142ENST00000529320ENST00000530323CIL_00071E_0002ENSMUSG00000024517ENSMUST00000025395ENSMUST00000173530ENSMUST00000173985ENSMUSG00000024518ENSMUST00000025396ENSMUSG00000097907ENSMUST00000181100
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000134438 ENST00000256852 N/A N/A N/A 0.155±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.051±0.01
ENST00000334889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555288 N/A N/A N/A N/A N/A N/A 0.105±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000591550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000134443 ENST00000256857 N/A N/A N/A N/A N/A 0.962±0.00 N/A N/A N/A 1.841±0.00 N/A N/A 0.123±0.00 0.681±0.00
ENST00000420468 N/A N/A N/A 0.701±0.00 N/A 2.465±0.00 N/A 0.104±0.00 N/A 4.018±0.00 N/A N/A N/A 1.024±0.00
ENST00000456142 N/A N/A N/A 0.246±0.00 0.347±0.00 N/A N/A N/A N/A N/A N/A 0.111±0.00 N/A N/A
ENST00000529320 N/A N/A N/A 0.466±0.00 N/A 0.349±0.00 N/A N/A N/A 0.088±0.00 N/A N/A N/A 0.704±0.00
ENST00000530323 N/A 0.032±0.00 N/A N/A 0.352±0.00 1.698±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024517 ENSMUST00000025395 0.083±0.04 N/A 0.244±0.00 2.710±2.21 N/A 0.694±0.29 N/A N/A 0.027±0.00 1.479±0.69 0.066±0.02 0.072±0.00 0.128±0.08 0.088±0.00
ENSMUST00000173530 0.129±0.00 N/A N/A N/A N/A 2.871±0.70 N/A N/A N/A 0.662±0.33 0.172±0.00 N/A N/A 0.135±0.01
ENSMUST00000173985 N/A N/A N/A 1.235±0.00 N/A 0.374±0.00 N/A N/A N/A 0.369±0.00 N/A N/A 0.054±0.01 N/A
ENSMUSG00000024518 ENSMUST00000025396 0.023±0.01 0.042±0.00 0.008±0.00 0.125±0.00 0.017±0.00 0.095±0.07 0.024±0.01 0.034±0.00 0.005±0.00 0.024±0.01 0.057±0.01 0.050±0.02 0.017±0.02 0.045±0.00
ENSMUSG00000097907 ENSMUST00000181100 N/A N/A N/A 0.088±0.01 N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A 0.013±0.00 0.020±0.01

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