C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: scavenger receptor class B, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000452464 SCARB2-002 ENSG00000138760 9606 - 4:76161286-76213603 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartMuscleOvaryPlacentaENST00000452464
Transcript ID Heart Muscle Ovary Placenta
ENST00000452464 11.755±0.00 38.206±0.00 12.263±0.00 19.110±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VL CIL_0008VL_0001 VISTA 4:76031495-76631676
CIL_00071G CIL_00071G_0001 CGP 4:76114659-76213893
CIL_00071J CIL_00071J_0001 CGP 4:76158737-76283780

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 IEA receptor activity
GO:0005515 IPI protein binding
GO:0005765 IDA lysosomal membrane
GO:0005925 IDA focal adhesion
GO:0006622 IMP protein targeting to lysosome
GO:0007155 IEA cell adhesion
GO:0016020 IDA:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0019899 IPI enzyme binding
GO:0043202 ISS lysosomal lumen
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031377 Scarb2-201 protein_coding Mus_musculus 0 852

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