C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00077Z_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000055291-ENSDARG00000075450 CGP 7955 12:24270740-24358575
GeneTranscriptPositionBiotype
ENSDARG00000055291 (rab18a)
RAB18A, member RAS oncogene family 		ENSDART00000077631 (rab18a-001) 24270755-24282787 protein_coding
ENSDART00000136042 (rab18a-002) 24270740-24281284 nonsense_mediated_decay
ENSDARG00000075450 (mkxa)
mohawk homeobox a 		ENSDART00000111801 (mkxa-001) 24311157-24358575 protein_coding
ENSDART00000149474 (mkxa-002) 24339503-24358575 retained_intron
CIL_00077Z_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000099246-ENSG00000150051 CGP 9606 10:27504174-27746060
GeneTranscriptPositionBiotype
ENSG00000099246 (RAB18)
RAB18, member RAS oncogene family 		ENST00000356940 (RAB18-001) 27504268-27542214 protein_coding
ENST00000375802 (RAB18-003) 27504328-27538140 protein_coding
ENST00000423465 (RAB18-005) 27504619-27537966 protein_coding
ENST00000465772 (RAB18-004) 27504377-27538489 processed_transcript
ENST00000484281 (RAB18-006) 27504394-27514217 processed_transcript
ENST00000490236 (RAB18-002) 27504299-27510490 retained_intron
ENST00000535776 (RAB18-201) 27504174-27542237 protein_coding
ENST00000611151 (RAB18-202) 27504174-27542237 protein_coding
ENST00000621805 (RAB18-203) 27504370-27542237 protein_coding
ENSG00000150051 (MKX)
mohawk homeobox 		ENST00000375790 (MKX-001) 27672875-27746060 protein_coding
ENST00000419761 (MKX-201) 27672875-27745849 protein_coding
ENST00000460919 (MKX-002) 27718563-27743545 protein_coding
ENST00000561227 (MKX-003) 27743242-27745594 protein_coding
ENSG00000230500 (MKX-AS1)
MKX antisense RNA 1 		ENST00000412244 (MKX-AS1-002) 27761589-27767793 antisense
ENST00000419777 (MKX-AS1-001) 27744786-27767794 antisense
CIL_00077Z_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000073639-ENSMUSG00000061013 CGP 10090 18:6765205-7004780
GeneTranscriptPositionBiotype
ENSMUSG00000061013 (Mkx)
mohawk homeobox 		ENSMUST00000079788 (Mkx-001) 6934966-7004780 protein_coding
ENSMUST00000176586 (Mkx-004) 6910459-6936621 processed_transcript
ENSMUST00000176608 (Mkx-003) 7000636-7003782 processed_transcript
ENSMUST00000176757 (Mkx-002) 7002304-7004726 retained_intron
ENSMUST00000188926 (Mkx-005) 6936952-6992988 retained_intron
ENSMUSG00000073639 (Rab18)
RAB18, member RAS oncogene family 		ENSMUST00000097680 (Rab18-201) 6765205-6790231 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00077Z_0001ENSDARG00000055291ENSDART00000077631ENSDART00000136042ENSDARG00000075450ENSDART00000111801ENSDART00000149474CIL_00077Z_0002ENSG00000099246ENST00000356940ENST00000375802ENST00000423465ENST00000465772ENST00000484281ENST00000490236ENST00000535776ENST00000611151ENST00000621805ENSG00000150051ENST00000375790ENST00000419761ENST00000460919ENST00000561227ENSG00000230500ENST00000412244ENST00000419777CIL_00077Z_0003ENSMUSG00000061013ENSMUST00000079788ENSMUST00000176586ENSMUST00000176608ENSMUST00000176757ENSMUST00000188926ENSMUSG00000073639ENSMUST00000097680
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00077Z_0001ENSDARG00000055291ENSDART00000077631ENSDARG00000075450ENSDART00000111801CIL_00077Z_0002ENSG00000099246ENST00000356940ENST00000375802ENST00000423465ENST00000465772ENST00000621805ENSG00000150051ENST00000375790ENST00000419761ENST00000460919ENST00000561227ENSG00000230500ENST00000412244ENST00000419777CIL_00077Z_0003ENSMUSG00000061013ENSMUST00000079788ENSMUST00000176608ENSMUST00000176757ENSMUST00000188926ENSMUSG00000073639ENSMUST00000097680
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000055291 ENSDART00000077631 N/A N/A N/A 18.483±2.40 N/A N/A 3.928±1.88 5.506±0.93 0.433±0.00 N/A 1.933±0.00 N/A N/A N/A
ENSDART00000136042 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000075450 ENSDART00000111801 N/A N/A N/A 4.539±0.81 N/A N/A 0.273±0.24 1.053±0.36 N/A N/A 0.303±0.00 N/A N/A N/A
ENSDART00000149474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000099246 ENST00000356940 N/A N/A N/A 5.668±3.20 1.360±0.00 3.140±0.00 2.015±0.00 3.259±0.00 3.829±0.00 2.583±0.61 0.651±0.00 6.689±1.55 3.215±2.57 5.004±0.00
ENST00000375802 14.038±0.00 9.605±0.00 N/A N/A 24.817±0.00 22.747±0.00 N/A N/A N/A N/A 3.931±1.90 9.969±0.00 9.175±0.51 12.537±0.00
ENST00000423465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.341±0.00
ENST00000465772 N/A N/A 8.555±0.00 16.298±0.13 7.330±0.00 7.401±0.00 11.843±5.17 13.141±2.63 13.023±0.00 9.037±0.00 1.746±0.00 10.162±1.02 9.788±0.00 9.851±0.00
ENST00000484281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621805 1.572±0.00 1.056±0.00 N/A 2.154±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.658±0.00
ENSG00000150051 ENST00000375790 0.206±0.00 N/A N/A 0.531±0.11 N/A 0.176±0.00 N/A N/A N/A N/A N/A 0.991±0.00 N/A N/A
ENST00000419761 0.165±0.00 0.350±0.00 N/A 1.691±0.00 0.064±0.00 0.813±0.00 0.020±0.00 0.077±0.06 0.085±0.00 0.755±0.00 0.040±0.00 2.749±0.00 0.009±0.00 N/A
ENST00000460919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.068±0.00 N/A
ENST00000561227 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.037±0.00 N/A N/A N/A N/A
ENSG00000230500 ENST00000412244 0.087±0.00 0.154±0.00 N/A 0.136±0.00 0.149±0.00 0.037±0.00 0.015±0.00 0.165±0.00 N/A 0.060±0.00 N/A 0.044±0.00 N/A 0.147±0.00
ENST00000419777 0.122±0.00 N/A N/A N/A N/A 0.042±0.00 0.024±0.00 N/A N/A N/A 0.213±0.00 0.327±0.07 0.159±0.00 0.084±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000061013 ENSMUST00000079788 0.192±0.18 1.477±0.11 0.197±0.06 0.459±0.35 0.040±0.01 1.838±0.79 0.029±0.00 0.106±0.05 0.157±0.12 0.092±0.06 0.118±0.04 3.594±1.39 0.225±0.07 0.114±0.06
ENSMUST00000176586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176608 N/A N/A 0.482±0.00 0.969±0.00 0.099±0.06 N/A 0.057±0.00 0.080±0.00 0.092±0.03 0.118±0.07 0.327±0.00 N/A N/A 0.219±0.09
ENSMUST00000176757 N/A 4.609±1.78 N/A N/A 0.163±0.06 3.114±0.97 0.146±0.08 0.107±0.00 0.667±0.20 0.216±0.07 0.360±0.00 10.034±3.37 0.559±0.00 0.295±0.00
ENSMUST00000188926 0.347±0.00 N/A N/A 4.455±0.00 0.139±0.06 N/A 0.177±0.01 0.431±0.00 0.170±0.00 N/A 0.171±0.00 12.900±0.00 0.589±0.11 0.184±0.00
ENSMUSG00000073639 ENSMUST00000097680 18.827±3.28 21.954±2.37 39.998±2.05 29.779±9.64 14.394±1.21 17.966±1.82 15.952±6.07 24.861±4.36 26.830±5.46 26.337±3.90 28.191±8.44 21.669±8.30 31.194±8.10 9.244±2.44

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