C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TRM2 tRNA methyltransferase 2B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128115 Trmt2b-002 ENSMUSG00000067369 10090 - X:134222339-134276982 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonKidneyLiverMuscleOvaryPlacentaENSMUST00000128115
Transcript ID Bladder Brain Breast Colon Kidney Liver Muscle Ovary Placenta
ENSMUST00000128115 1.379±0.28 0.245±0.00 0.810±0.00 0.849±0.11 1.012±0.00 0.691±0.14 0.367±0.02 1.784±0.00 0.336±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007AZ CIL_0007AZ_0002 CGP X:134187501-134276984
CIL_0007B0 CIL_0007B0_0002 CGP X:134222339-134305969

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372935 TRMT2B-001 protein_coding Homo_sapiens 0 1101
ENST00000372936 TRMT2B-003 protein_coding Homo_sapiens 0 1101
ENST00000372939 TRMT2B-004 protein_coding Homo_sapiens 0 819
ENST00000478422 TRMT2B-005 processed_transcript Homo_sapiens 0 409
ENST00000545398 TRMT2B-201 protein_coding Homo_sapiens 0 1101

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