C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007EJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000181781-ENSG00000099866 CGP 9606 19:463346-505343
GeneTranscriptPositionBiotype
ENSG00000099866 (MADCAM1)
mucosal vascular addressin cell adhesion molecule 1 		ENST00000215637 (MADCAM1-002) 496494-505343 protein_coding
ENST00000346144 (MADCAM1-001) 496454-505340 protein_coding
ENST00000382683 (MADCAM1-003) 496500-504965 protein_coding
ENST00000587541 (MADCAM1-004) 489176-505343 protein_coding
ENST00000613880 (MADCAM1-201) 496454-505207 protein_coding
ENST00000617201 (MADCAM1-202) 496454-505207 protein_coding
ENST00000619333 (MADCAM1-203) 496454-505207 protein_coding
ENST00000621286 (MADCAM1-204) 496500-504965 protein_coding
ENST00000622449 (MADCAM1-005) 497818-498727 retained_intron
ENST00000622462 (MADCAM1-205) 496454-505207 protein_coding
ENSG00000181781 (ODF3L2)
outer dense fiber of sperm tails 3-like 2 		ENST00000315489 (ODF3L2-001) 463346-474983 protein_coding
ENST00000382696 (ODF3L2-002) 463346-474880 protein_coding
ENST00000591681 (ODF3L2-003) 464146-472636 retained_intron
ENSG00000266933 (AC005775.2)
 ENST00000592413 (AC005775.2-001) 490046-507833 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0007EJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035963-ENSMUSG00000020310 CGP 10090 10:79639526-79668536
GeneTranscriptPositionBiotype
ENSMUSG00000020310 (Madcam1)
mucosal vascular addressin cell adhesion molecule 1 		ENSMUST00000020554 (Madcam1-201) 79664574-79668536 protein_coding
ENSMUSG00000035963 (Odf3l2)
outer dense fiber of sperm tails 3-like 2 		ENSMUST00000095464 (Odf3l2-201) 79639526-79645738 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007EJ_0001ENSG00000099866ENST00000215637ENST00000346144ENST00000382683ENST00000587541ENST00000613880ENST00000617201ENST00000619333ENST00000621286ENST00000622449ENST00000622462ENSG00000181781ENST00000315489ENST00000382696ENST00000591681ENSG00000266933ENST00000592413CIL_0007EJ_0002ENSMUSG00000020310ENSMUST00000020554ENSMUSG00000035963ENSMUST00000095464
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007EJ_0001ENSG00000099866ENST00000215637ENST00000346144ENST00000587541ENST00000613880ENST00000621286ENST00000622449ENST00000622462ENSG00000181781ENST00000315489ENST00000382696ENST00000591681ENSG00000266933ENST00000592413CIL_0007EJ_0002ENSMUSG00000020310ENSMUST00000020554ENSMUSG00000035963ENSMUST00000095464
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000099866 ENST00000215637 N/A N/A N/A N/A N/A 0.897±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000346144 N/A 0.303±0.00 N/A N/A N/A N/A N/A 0.105±0.00 0.219±0.00 0.528±0.00 N/A 0.081±0.00 0.072±0.00 N/A
ENST00000382683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587541 0.166±0.00 0.056±0.00 N/A 0.956±0.36 0.402±0.00 0.282±0.00 N/A N/A N/A N/A N/A 0.198±0.00 0.137±0.04 0.566±0.01
ENST00000613880 0.045±0.00 N/A N/A N/A 0.064±0.00 N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000617201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621286 N/A N/A N/A N/A N/A 0.511±0.00 N/A N/A N/A N/A N/A N/A N/A 0.222±0.00
ENST00000622449 N/A N/A N/A 1.085±0.00 N/A N/A 0.086±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000622462 N/A N/A N/A N/A N/A 0.058±0.00 N/A N/A N/A N/A N/A 0.046±0.00 N/A N/A
ENSG00000181781 ENST00000315489 N/A N/A N/A N/A 0.688±0.00 N/A 0.122±0.00 N/A N/A N/A 0.368±0.00 N/A 0.425±0.14 N/A
ENST00000382696 N/A 0.194±0.00 N/A 0.559±0.00 N/A 0.158±0.00 N/A N/A 0.051±0.00 0.218±0.00 1.081±0.00 0.115±0.00 0.302±0.07 N/A
ENST00000591681 0.116±0.00 0.293±0.00 N/A N/A N/A N/A 0.123±0.00 0.136±0.00 N/A 0.062±0.00 1.324±0.00 N/A 0.277±0.09 3.867±0.00
ENSG00000266933 ENST00000592413 N/A N/A N/A 0.900±0.00 N/A N/A N/A 0.130±0.00 N/A 0.831±0.00 N/A N/A 0.596±0.00 1.511±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020310 ENSMUST00000020554 0.125±0.02 0.091±0.04 0.006±0.00 0.217±0.02 1.290±0.76 1.151±0.80 N/A 0.102±0.07 0.094±0.07 0.034±0.02 0.145±0.12 0.138±0.08 0.419±0.52 0.194±0.02
ENSMUSG00000035963 ENSMUST00000095464 N/A N/A N/A 0.065±0.05 0.632±0.40 N/A N/A 0.061±0.01 0.008±0.00 N/A 24.641±10.08 0.063±0.00 N/A N/A

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