C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007ES_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000002215-ENSDARG00000040109 CGP 7955 22:16497252-16519609
GeneTranscriptPositionBiotype
ENSDARG00000002215 (rtca)
RNA 3'-terminal phosphate cyclase 		ENSDART00000021666 (rtca-001) 16497252-16506149 protein_coding
ENSDART00000149071 (rtca-002) 16500254-16501130 processed_transcript
ENSDARG00000040109 (dbt)
dihydrolipoamide branched chain transacylase E2 		ENSDART00000058662 (dbt-001) 16508269-16519609 protein_coding
ENSDART00000149550 (dbt-002) 16516132-16517135 processed_transcript
CIL_0007ES_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000000339-ENSMUSG00000000340 CGP 10090 3:116488963-116549976
GeneTranscriptPositionBiotype
ENSMUSG00000000339 (Rtca)
RNA 3'-terminal phosphate cyclase 		ENSMUST00000000348 (Rtca-001) 116488963-116508208 protein_coding
ENSMUST00000124486 (Rtca-005) 116489240-116495965 retained_intron
ENSMUST00000140677 (Rtca-003) 116494151-116508024 nonsense_mediated_decay
ENSMUST00000143425 (Rtca-004) 116499546-116508133 nonsense_mediated_decay
ENSMUST00000153005 (Rtca-002) 116495691-116508065 protein_coding
ENSMUSG00000000340 (Dbt)
dihydrolipoamide branched chain transacylase E2 		ENSMUST00000000349 (Dbt-001) 116513070-116549976 protein_coding
ENSMUSG00000082394 (Gm4596)
predicted gene 4596 		ENSMUST00000117197 (Gm4596-001) 116528137-116528578 processed_pseudogene
ENSMUSG00000097737 (Gm26530)
predicted gene, 26530 		ENSMUST00000180969 (Gm26530-201) 116488966-116493358 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007ES_0001ENSDARG00000002215ENSDART00000021666ENSDART00000149071ENSDARG00000040109ENSDART00000058662ENSDART00000149550CIL_0007ES_0002ENSMUSG00000000339ENSMUST00000000348ENSMUST00000124486ENSMUST00000140677ENSMUST00000143425ENSMUST00000153005ENSMUSG00000000340ENSMUST00000000349ENSMUSG00000082394ENSMUST00000117197ENSMUSG00000097737ENSMUST00000180969
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007ES_0001ENSDARG00000002215ENSDART00000021666ENSDARG00000040109ENSDART00000058662CIL_0007ES_0002ENSMUSG00000000339ENSMUST00000000348ENSMUST00000124486ENSMUST00000140677ENSMUST00000143425ENSMUSG00000000340ENSMUST00000000349ENSMUSG00000082394ENSMUST00000117197ENSMUSG00000097737ENSMUST00000180969
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000002215 ENSDART00000021666 N/A N/A N/A 7.101±0.66 N/A N/A 21.966±8.83 23.180±4.20 2.166±0.00 N/A 5.908±0.00 N/A N/A N/A
ENSDART00000149071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000040109 ENSDART00000058662 N/A N/A N/A 6.726±2.68 N/A N/A 15.358±7.66 9.489±0.00 1.301±0.00 N/A 3.907±0.00 N/A N/A N/A
ENSDART00000149550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000339 ENSMUST00000000348 2.765±1.12 3.163±1.46 7.756±1.02 14.997±3.83 3.580±0.82 5.543±1.13 2.631±0.64 3.594±1.94 4.444±2.87 4.410±1.14 6.568±0.72 4.982±1.92 10.079±1.80 17.672±6.98
ENSMUST00000124486 N/A N/A N/A 26.572±0.00 N/A N/A N/A N/A N/A N/A N/A 7.885±0.27 10.737±3.40 25.433±0.00
ENSMUST00000140677 N/A N/A N/A 10.067±0.00 N/A N/A 2.390±0.36 N/A 1.456±0.00 N/A 3.125±0.39 N/A 6.369±0.00 20.947±2.58
ENSMUST00000143425 6.399±1.67 24.391±8.72 N/A N/A 9.942±3.57 18.383±1.99 2.746±0.27 7.439±1.53 3.055±0.42 7.250±1.66 N/A 16.532±3.63 6.537±0.00 22.541±3.18
ENSMUST00000153005 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000000340 ENSMUST00000000349 10.418±3.72 21.835±1.81 6.586±0.60 2.808±1.06 9.389±3.30 5.221±1.03 15.168±0.91 26.019±1.25 22.622±11.78 5.284±0.48 8.302±1.37 6.807±2.31 4.205±1.98 1.483±0.24
ENSMUSG00000082394 ENSMUST00000117197 0.153±0.02 N/A N/A 0.054±0.00 0.208±0.05 N/A 0.215±0.00 0.182±0.07 0.237±0.11 N/A 0.106±0.00 N/A N/A 0.298±0.22
ENSMUSG00000097737 ENSMUST00000180969 2.017±0.40 2.304±0.42 2.022±0.17 3.381±1.84 2.003±0.53 2.408±0.24 1.003±0.09 2.512±0.08 1.137±0.50 1.850±0.31 0.801±0.16 3.020±0.97 1.407±0.83 3.464±3.07

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