C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0007FD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000134438-ENSG00000166569 CGP 9606 18:59267035-59318649
GeneTranscriptPositionBiotype
ENSG00000134438 (RAX)
retina and anterior neural fold homeobox
ENST00000256852 (RAX-002) 59267035-59273385 protein_coding
ENST00000334889 (RAX-001) 59267035-59273393 protein_coding
ENST00000555288 (RAX-003) 59272985-59274086 protein_coding
ENST00000591550 (RAX-004) 59272418-59272920 retained_intron
ENSG00000166569 (CPLX4)
complexin 4
ENST00000299721 (CPLX4-001) 59295402-59318649 protein_coding
ENST00000587244 (CPLX4-002) 59275156-59318544 protein_coding
CIL_0007FD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024518-ENSMUSG00000024519 CGP 10090 18:65934639-65970178
GeneTranscriptPositionBiotype
ENSMUSG00000024518 (Rax)
retina and anterior neural fold homeobox
ENSMUST00000025396 (Rax-201) 65934639-65939089 protein_coding
ENSMUSG00000024519 (Cplx4)
complexin 4
ENSMUST00000025397 (Cplx4-201) 65955727-65970178 protein_coding
ENSMUSG00000097907 (Raxos1)
retina and anterior neural fold homeobox, opposite strand 1
ENSMUST00000181100 (Raxos1-201) 65937538-65940447 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007FD_0001ENSG00000134438ENST00000256852ENST00000334889ENST00000555288ENST00000591550ENSG00000166569ENST00000299721ENST00000587244CIL_0007FD_0002ENSMUSG00000024518ENSMUST00000025396ENSMUSG00000024519ENSMUST00000025397ENSMUSG00000097907ENSMUST00000181100
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007FD_0001ENSG00000134438ENST00000256852ENST00000555288ENSG00000166569ENST00000299721ENST00000587244CIL_0007FD_0002ENSMUSG00000024518ENSMUST00000025396ENSMUSG00000024519ENSMUST00000025397ENSMUSG00000097907ENSMUST00000181100
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000134438 ENST00000256852 N/A N/A N/A 0.155±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.051±0.01
ENST00000334889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555288 N/A N/A N/A N/A N/A N/A 0.105±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000591550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166569 ENST00000299721 N/A 0.024±0.00 N/A N/A 0.020±0.01 0.016±0.00 N/A N/A 0.020±0.00 N/A N/A 0.014±0.00 0.020±0.00 0.056±0.01
ENST00000587244 N/A N/A N/A 0.016±0.00 0.007±0.00 0.020±0.00 N/A N/A N/A N/A 0.026±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024518 ENSMUST00000025396 0.023±0.01 0.042±0.00 0.008±0.00 0.125±0.00 0.017±0.00 0.095±0.07 0.024±0.01 0.034±0.00 0.005±0.00 0.024±0.01 0.057±0.01 0.050±0.02 0.017±0.02 0.045±0.00
ENSMUSG00000024519 ENSMUST00000025397 0.079±0.00 N/A N/A 0.010±0.00 N/A N/A N/A 0.069±0.00 N/A N/A 0.026±0.00 N/A N/A N/A
ENSMUSG00000097907 ENSMUST00000181100 N/A N/A N/A 0.088±0.01 N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A 0.013±0.00 0.020±0.01

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