C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007G7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000060751-ENSDARG00000073737 CGP 7955 5:17131328-17284907
GeneTranscriptPositionBiotype
ENSDARG00000060751 (taok3a)
TAO kinase 3a 		ENSDART00000085943 (taok3a-201) 17132443-17198069 protein_coding
ENSDART00000140668 (taok3a-001) 17131328-17265293 protein_coding
ENSDARG00000073737 (suds3)
suppressor of defective silencing 3 homolog (SDS3, S. cerevisiae) 		ENSDART00000111646 (suds3-001) 17266480-17284907 protein_coding
ENSDART00000114446 (suds3-201) 17266499-17284894 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0007G7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000135090-ENSG00000111707 CGP 9606 12:118149801-118418031
GeneTranscriptPositionBiotype
ENSG00000135090 (TAOK3)
TAO kinase 3 		ENST00000392533 (TAOK3-001) 118149801-118372945 protein_coding
ENST00000419821 (TAOK3-002) 118149801-118359720 protein_coding
ENST00000535570 (TAOK3-016) 118238102-118256059 protein_coding
ENST00000536584 (TAOK3-005) 118198390-118214171 retained_intron
ENST00000536979 (TAOK3-017) 118150909-118152753 protein_coding
ENST00000537305 (TAOK3-004) 118150443-118243490 retained_intron
ENST00000537569 (TAOK3-019) 118159776-118161879 retained_intron
ENST00000537822 (TAOK3-007) 118181515-118190551 protein_coding
ENST00000537952 (TAOK3-006) 118150957-118190545 protein_coding
ENST00000538601 (TAOK3-003) 118201422-118243448 protein_coding
ENST00000539872 (TAOK3-013) 118255512-118359121 protein_coding
ENST00000540561 (TAOK3-008) 118181442-118190522 protein_coding
ENST00000541186 (TAOK3-011) 118243430-118359105 protein_coding
ENST00000541786 (TAOK3-014) 118255504-118359676 protein_coding
ENST00000541878 (TAOK3-009) 118244901-118359720 protein_coding
ENST00000542532 (TAOK3-012) 118255460-118372889 protein_coding
ENST00000542692 (TAOK3-015) 118255596-118372893 processed_transcript
ENST00000542902 (TAOK3-010) 118244914-118359166 protein_coding
ENST00000543709 (TAOK3-018) 118149942-118160358 processed_transcript
ENSG00000221280 (AC026366.1)
 ENST00000408353 (AC026366.1-201) 118166799-118166871 miRNA
ENSG00000240342 (RPS2P5)
ribosomal protein S2 pseudogene 5 		ENST00000488803 (RPS2P5-001) 118246084-118246962 processed_pseudogene
ENSG00000270482 (RP11-131L12.2)
 ENST00000605329 (RP11-131L12.2-001) 118375350-118376275 lincRNA
ENSG00000278227 (AC026367.1)
 ENST00000614541 (AC026367.1-201) 118368464-118368558 miRNA

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007G7_0001ENSDARG00000060751ENSDART00000085943ENSDART00000140668ENSDARG00000073737ENSDART00000111646ENSDART00000114446CIL_0007G7_0002ENSG00000135090ENST00000392533ENST00000419821ENST00000535570ENST00000536584ENST00000536979ENST00000537305ENST00000537569ENST00000537822ENST00000537952ENST00000538601ENST00000539872ENST00000540561ENST00000541186ENST00000541786ENST00000541878ENST00000542532ENST00000542692ENST00000542902ENST00000543709ENSG00000221280ENST00000408353ENSG00000240342ENST00000488803ENSG00000270482ENST00000605329ENSG00000278227ENST00000614541
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007G7_0001ENSDARG00000060751ENSDART00000085943ENSDART00000140668ENSDARG00000073737ENSDART00000111646ENSDART00000114446CIL_0007G7_0002ENSG00000135090ENST00000392533ENST00000419821ENST00000537305ENST00000537952ENSG00000221280ENST00000408353ENSG00000240342ENST00000488803ENSG00000270482ENST00000605329ENSG00000278227ENST00000614541
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000060751 ENSDART00000085943 N/A N/A N/A 1.682±0.12 N/A N/A 1.420±0.00 N/A N/A N/A 0.792±0.00 N/A N/A N/A
ENSDART00000140668 N/A N/A N/A 4.148±1.67 N/A N/A 1.550±0.85 2.835±2.62 0.452±0.00 N/A 1.015±0.00 N/A N/A N/A
ENSDARG00000073737 ENSDART00000111646 N/A N/A N/A 13.519±9.60 N/A N/A 2.920±1.68 16.359±8.72 N/A N/A 1.132±0.00 N/A N/A N/A
ENSDART00000114446 N/A N/A N/A 7.791±3.36 N/A N/A 14.908±11.18 7.462±0.00 0.657±0.00 N/A 1.426±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135090 ENST00000392533 3.472±0.00 2.865±0.00 N/A 2.189±1.07 1.964±0.00 1.922±0.48 1.423±1.18 1.338±0.04 1.009±0.00 2.483±0.82 0.918±0.00 2.643±0.69 2.688±1.01 3.082±0.30
ENST00000419821 N/A N/A 0.607±0.00 N/A N/A 0.784±0.00 N/A N/A N/A 1.040±0.00 N/A 1.020±0.00 N/A N/A
ENST00000535570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536979 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537305 N/A N/A 0.626±0.00 N/A N/A N/A 0.270±0.00 N/A 1.193±0.00 1.383±0.00 N/A N/A N/A N/A
ENST00000537569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537952 N/A N/A N/A 5.191±0.66 1.775±0.00 N/A 0.690±0.00 1.081±0.00 3.766±0.00 2.094±0.00 0.718±0.00 6.916±2.98 3.776±0.00 N/A
ENST00000538601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540561 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541878 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000221280 ENST00000408353 N/A 0.322±0.00 N/A 0.306±0.00 0.289±0.00 N/A N/A 0.884±0.00 N/A N/A N/A 42.630±0.00 N/A 0.283±0.00
ENSG00000240342 ENST00000488803 N/A 37.077±0.00 N/A 2.358±0.86 9.153±0.44 12.035±10.52 N/A 3.425±0.34 N/A 6.824±0.00 16.902±0.00 55.225±87.40 180.791±136.21 2.956±2.71
ENSG00000270482 ENST00000605329 N/A 0.210±0.00 N/A 0.243±0.18 N/A 0.129±0.00 0.068±0.00 0.094±0.00 0.212±0.00 N/A 0.301±0.00 0.165±0.09 0.267±0.15 1.813±0.46
ENSG00000278227 ENST00000614541 N/A 0.319±0.00 N/A N/A N/A 0.274±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

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